Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ALMS1Q8TCU4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.65■□□□□ 0.42
ALMS1Q8TCU4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ALMS1Q8TCU4 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ALMS1Q8TCU4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ALMS1Q8TCU4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC17.63■□□□□ 0.41
ALMS1Q8TCU4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ALMS1Q8TCU4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.63■□□□□ 0.41
ALMS1Q8TCU4 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ALMS1Q8TCU4 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.63■□□□□ 0.41
ALMS1Q8TCU4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ALMS1Q8TCU4 AL161658.1-201ENST00000623641 1967 ntBASIC17.62■□□□□ 0.41
ALMS1Q8TCU4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
ALMS1Q8TCU4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ALMS1Q8TCU4 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ALMS1Q8TCU4 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ALMS1Q8TCU4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.61■□□□□ 0.41
ALMS1Q8TCU4 AC010864.1-201ENST00000609407 1511 ntBASIC17.61■□□□□ 0.41
ALMS1Q8TCU4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ALMS1Q8TCU4 AC007029.1-201ENST00000604183 313 ntBASIC17.61■□□□□ 0.41
ALMS1Q8TCU4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALMS1Q8TCU4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALMS1Q8TCU4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALMS1Q8TCU4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
ALMS1Q8TCU4 AC127502.1-201ENST00000399971 1502 ntBASIC17.59■□□□□ 0.41
ALMS1Q8TCU4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALMS1Q8TCU4 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC17.59■□□□□ 0.41
ALMS1Q8TCU4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ALMS1Q8TCU4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ALMS1Q8TCU4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ALMS1Q8TCU4 AC110285.7-201ENST00000624417 1536 ntBASIC17.58■□□□□ 0.41
ALMS1Q8TCU4 AC009299.2-201ENST00000482477 511 ntBASIC17.58■□□□□ 0.41
ALMS1Q8TCU4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ALMS1Q8TCU4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ALMS1Q8TCU4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
ALMS1Q8TCU4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ALMS1Q8TCU4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ALMS1Q8TCU4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
ALMS1Q8TCU4 MIR219A2-201ENST00000608502 1504 ntBASIC17.58■□□□□ 0.4
ALMS1Q8TCU4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC17.58■□□□□ 0.4
ALMS1Q8TCU4 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALMS1Q8TCU4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALMS1Q8TCU4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
ALMS1Q8TCU4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ALMS1Q8TCU4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALMS1Q8TCU4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALMS1Q8TCU4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ALMS1Q8TCU4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.56■□□□□ 0.4
ALMS1Q8TCU4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.56■□□□□ 0.4
ALMS1Q8TCU4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.56■□□□□ 0.4
ALMS1Q8TCU4 AC135983.2-203ENST00000454486 1613 ntBASIC17.56■□□□□ 0.4
ALMS1Q8TCU4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ALMS1Q8TCU4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ALMS1Q8TCU4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ALMS1Q8TCU4 DUX4L18-201ENST00000553347 1267 ntBASIC17.55■□□□□ 0.4
ALMS1Q8TCU4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.55■□□□□ 0.4
ALMS1Q8TCU4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ALMS1Q8TCU4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALMS1Q8TCU4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
ALMS1Q8TCU4 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC17.54■□□□□ 0.4
ALMS1Q8TCU4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ALMS1Q8TCU4 AC009831.1-201ENST00000580420 1582 ntBASIC17.54■□□□□ 0.4
ALMS1Q8TCU4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALMS1Q8TCU4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ALMS1Q8TCU4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.54■□□□□ 0.4
ALMS1Q8TCU4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC17.54■□□□□ 0.4
ALMS1Q8TCU4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALMS1Q8TCU4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALMS1Q8TCU4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.54■□□□□ 0.4
ALMS1Q8TCU4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALMS1Q8TCU4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALMS1Q8TCU4 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ALMS1Q8TCU4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ALMS1Q8TCU4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ALMS1Q8TCU4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ALMS1Q8TCU4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ALMS1Q8TCU4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.51■□□□□ 0.39
ALMS1Q8TCU4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.51■□□□□ 0.39
ALMS1Q8TCU4 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ALMS1Q8TCU4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ALMS1Q8TCU4 KRT8P33-201ENST00000508125 1423 ntBASIC17.51■□□□□ 0.39
ALMS1Q8TCU4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ALMS1Q8TCU4 ECEL1P2-201ENST00000461596 1295 ntBASIC17.5■□□□□ 0.39
ALMS1Q8TCU4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ALMS1Q8TCU4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ALMS1Q8TCU4 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ALMS1Q8TCU4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.5■□□□□ 0.39
ALMS1Q8TCU4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALMS1Q8TCU4 RP9P-202ENST00000450133 1212 ntBASIC17.49■□□□□ 0.39
ALMS1Q8TCU4 THA1P-201ENST00000590384 1145 ntBASIC17.49■□□□□ 0.39
ALMS1Q8TCU4 DUX4L9-201ENST00000449051 1259 ntBASIC17.48■□□□□ 0.39
ALMS1Q8TCU4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALMS1Q8TCU4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.48■□□□□ 0.39
ALMS1Q8TCU4 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.48■□□□□ 0.39
ALMS1Q8TCU4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
ALMS1Q8TCU4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
ALMS1Q8TCU4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ALMS1Q8TCU4 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALMS1Q8TCU4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.47■□□□□ 0.39
ALMS1Q8TCU4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms