Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SNIP1Q8TAD8 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC24.18■■□□□ 1.46
SNIP1Q8TAD8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.18■■□□□ 1.46
SNIP1Q8TAD8 AL035685.1-201ENST00000636663 812 ntBASIC24.18■■□□□ 1.46
SNIP1Q8TAD8 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SNIP1Q8TAD8 MIR219A2-201ENST00000608502 1504 ntBASIC24.18■■□□□ 1.46
SNIP1Q8TAD8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.17■■□□□ 1.46
SNIP1Q8TAD8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.17■■□□□ 1.46
SNIP1Q8TAD8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SNIP1Q8TAD8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SNIP1Q8TAD8 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SNIP1Q8TAD8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SNIP1Q8TAD8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
SNIP1Q8TAD8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.15■■□□□ 1.46
SNIP1Q8TAD8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SNIP1Q8TAD8 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC24.15■■□□□ 1.46
SNIP1Q8TAD8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.14■■□□□ 1.45
SNIP1Q8TAD8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SNIP1Q8TAD8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.14■■□□□ 1.45
SNIP1Q8TAD8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
SNIP1Q8TAD8 AC126177.7-201ENST00000547904 679 ntBASIC24.13■■□□□ 1.45
SNIP1Q8TAD8 AC127502.1-201ENST00000399971 1502 ntBASIC24.13■■□□□ 1.45
SNIP1Q8TAD8 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC24.12■■□□□ 1.45
SNIP1Q8TAD8 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
SNIP1Q8TAD8 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SNIP1Q8TAD8 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SNIP1Q8TAD8 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
SNIP1Q8TAD8 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.12■■□□□ 1.45
SNIP1Q8TAD8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
SNIP1Q8TAD8 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
SNIP1Q8TAD8 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
SNIP1Q8TAD8 AC129492.7-201ENST00000622992 756 ntBASIC24.11■■□□□ 1.45
SNIP1Q8TAD8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
SNIP1Q8TAD8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SNIP1Q8TAD8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SNIP1Q8TAD8 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
SNIP1Q8TAD8 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC24.09■■□□□ 1.45
SNIP1Q8TAD8 AL451085.2-201ENST00000605085 799 ntBASIC24.09■■□□□ 1.45
SNIP1Q8TAD8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
SNIP1Q8TAD8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
SNIP1Q8TAD8 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SNIP1Q8TAD8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.08■■□□□ 1.45
SNIP1Q8TAD8 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SNIP1Q8TAD8 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24.07■■□□□ 1.44
SNIP1Q8TAD8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
SNIP1Q8TAD8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.07■■□□□ 1.44
SNIP1Q8TAD8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
SNIP1Q8TAD8 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SNIP1Q8TAD8 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SNIP1Q8TAD8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
SNIP1Q8TAD8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
SNIP1Q8TAD8 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SNIP1Q8TAD8 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SNIP1Q8TAD8 AC019069.1-201ENST00000610008 1333 ntBASIC24.06■■□□□ 1.44
SNIP1Q8TAD8 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SNIP1Q8TAD8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
SNIP1Q8TAD8 AL592295.1-201ENST00000400984 884 ntBASIC24.05■■□□□ 1.44
SNIP1Q8TAD8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.05■■□□□ 1.44
SNIP1Q8TAD8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.05■■□□□ 1.44
SNIP1Q8TAD8 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
SNIP1Q8TAD8 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
SNIP1Q8TAD8 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SNIP1Q8TAD8 AC007029.1-201ENST00000604183 313 ntBASIC24.04■■□□□ 1.44
SNIP1Q8TAD8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.04■■□□□ 1.44
SNIP1Q8TAD8 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.04■■□□□ 1.44
SNIP1Q8TAD8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.04■■□□□ 1.44
SNIP1Q8TAD8 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
SNIP1Q8TAD8 AL157400.5-201ENST00000507624 621 ntBASIC24.03■■□□□ 1.44
SNIP1Q8TAD8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.03■■□□□ 1.44
SNIP1Q8TAD8 DUX4L18-201ENST00000553347 1267 ntBASIC24.03■■□□□ 1.44
SNIP1Q8TAD8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SNIP1Q8TAD8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
SNIP1Q8TAD8 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.02■■□□□ 1.44
SNIP1Q8TAD8 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SNIP1Q8TAD8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SNIP1Q8TAD8 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SNIP1Q8TAD8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
SNIP1Q8TAD8 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SNIP1Q8TAD8 AL592293.1-201ENST00000502889 1188 ntBASIC24.01■■□□□ 1.43
SNIP1Q8TAD8 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24■■□□□ 1.43
SNIP1Q8TAD8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
SNIP1Q8TAD8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24■■□□□ 1.43
SNIP1Q8TAD8 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC24■■□□□ 1.43
SNIP1Q8TAD8 REST-210ENST00000638187 1334 ntTSL 5 BASIC24■■□□□ 1.43
SNIP1Q8TAD8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SNIP1Q8TAD8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24■■□□□ 1.43
SNIP1Q8TAD8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SNIP1Q8TAD8 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SNIP1Q8TAD8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SNIP1Q8TAD8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
SNIP1Q8TAD8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
SNIP1Q8TAD8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.99■■□□□ 1.43
SNIP1Q8TAD8 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.99■■□□□ 1.43
SNIP1Q8TAD8 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.99■■□□□ 1.43
SNIP1Q8TAD8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SNIP1Q8TAD8 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.99■■□□□ 1.43
SNIP1Q8TAD8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.98■■□□□ 1.43
SNIP1Q8TAD8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SNIP1Q8TAD8 AC009831.1-201ENST00000580420 1582 ntBASIC23.98■■□□□ 1.43
SNIP1Q8TAD8 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms