Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 DUX4L24-201ENST00000617576 1269 ntBASIC20.99■□□□□ 0.95
C11orf42Q8N5U0 DUX4L22-201ENST00000618238 1269 ntBASIC20.99■□□□□ 0.95
C11orf42Q8N5U0 DUX4L20-201ENST00000619712 1269 ntBASIC20.99■□□□□ 0.95
C11orf42Q8N5U0 DUX4L21-201ENST00000622058 1269 ntBASIC20.99■□□□□ 0.95
C11orf42Q8N5U0 DUX4L10-201ENST00000622460 1267 ntBASIC20.99■□□□□ 0.95
C11orf42Q8N5U0 DUX4L25-201ENST00000624915 1269 ntBASIC20.99■□□□□ 0.95
C11orf42Q8N5U0 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.99■□□□□ 0.95
C11orf42Q8N5U0 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
C11orf42Q8N5U0 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
C11orf42Q8N5U0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
C11orf42Q8N5U0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
C11orf42Q8N5U0 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
C11orf42Q8N5U0 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
C11orf42Q8N5U0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
C11orf42Q8N5U0 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
C11orf42Q8N5U0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.97■□□□□ 0.95
C11orf42Q8N5U0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.97■□□□□ 0.95
C11orf42Q8N5U0 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
C11orf42Q8N5U0 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
C11orf42Q8N5U0 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
C11orf42Q8N5U0 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
C11orf42Q8N5U0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
C11orf42Q8N5U0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
C11orf42Q8N5U0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.96■□□□□ 0.95
C11orf42Q8N5U0 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
C11orf42Q8N5U0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
C11orf42Q8N5U0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.96■□□□□ 0.95
C11orf42Q8N5U0 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
C11orf42Q8N5U0 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
C11orf42Q8N5U0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.95■□□□□ 0.94
C11orf42Q8N5U0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
C11orf42Q8N5U0 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
C11orf42Q8N5U0 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
C11orf42Q8N5U0 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
C11orf42Q8N5U0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
C11orf42Q8N5U0 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.94■□□□□ 0.94
C11orf42Q8N5U0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
C11orf42Q8N5U0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.94■□□□□ 0.94
C11orf42Q8N5U0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
C11orf42Q8N5U0 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
C11orf42Q8N5U0 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
C11orf42Q8N5U0 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
C11orf42Q8N5U0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
C11orf42Q8N5U0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.93■□□□□ 0.94
C11orf42Q8N5U0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.93■□□□□ 0.94
C11orf42Q8N5U0 MIR3648-2-201ENST00000581792 180 ntBASIC20.93■□□□□ 0.94
C11orf42Q8N5U0 MIR3648-1-201ENST00000615959 180 ntBASIC20.93■□□□□ 0.94
C11orf42Q8N5U0 CR559946.2-201ENST00000623684 991 ntBASIC20.93■□□□□ 0.94
C11orf42Q8N5U0 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.93■□□□□ 0.94
C11orf42Q8N5U0 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
C11orf42Q8N5U0 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
C11orf42Q8N5U0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
C11orf42Q8N5U0 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.92■□□□□ 0.94
C11orf42Q8N5U0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
C11orf42Q8N5U0 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
C11orf42Q8N5U0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
C11orf42Q8N5U0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.91■□□□□ 0.94
C11orf42Q8N5U0 DRD5P2-201ENST00000421395 2012 ntBASIC20.9■□□□□ 0.94
C11orf42Q8N5U0 AC110285.7-201ENST00000624417 1536 ntBASIC20.9■□□□□ 0.94
C11orf42Q8N5U0 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C11orf42Q8N5U0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
C11orf42Q8N5U0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.9■□□□□ 0.94
C11orf42Q8N5U0 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C11orf42Q8N5U0 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.89■□□□□ 0.93
C11orf42Q8N5U0 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.89■□□□□ 0.93
C11orf42Q8N5U0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
C11orf42Q8N5U0 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
C11orf42Q8N5U0 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
C11orf42Q8N5U0 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
C11orf42Q8N5U0 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
C11orf42Q8N5U0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
C11orf42Q8N5U0 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C11orf42Q8N5U0 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.87■□□□□ 0.93
C11orf42Q8N5U0 AC016575.1-201ENST00000607026 382 ntBASIC20.87■□□□□ 0.93
C11orf42Q8N5U0 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
C11orf42Q8N5U0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.86■□□□□ 0.93
C11orf42Q8N5U0 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
C11orf42Q8N5U0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
C11orf42Q8N5U0 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C11orf42Q8N5U0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C11orf42Q8N5U0 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
C11orf42Q8N5U0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
C11orf42Q8N5U0 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.85■□□□□ 0.93
C11orf42Q8N5U0 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
C11orf42Q8N5U0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
C11orf42Q8N5U0 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
C11orf42Q8N5U0 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
C11orf42Q8N5U0 AP002414.2-202ENST00000590929 1450 ntBASIC20.84■□□□□ 0.93
C11orf42Q8N5U0 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
C11orf42Q8N5U0 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
C11orf42Q8N5U0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.83■□□□□ 0.93
C11orf42Q8N5U0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
C11orf42Q8N5U0 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.83■□□□□ 0.92
C11orf42Q8N5U0 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.83■□□□□ 0.92
C11orf42Q8N5U0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.82■□□□□ 0.92
C11orf42Q8N5U0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
C11orf42Q8N5U0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C11orf42Q8N5U0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C11orf42Q8N5U0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.81■□□□□ 0.92
C11orf42Q8N5U0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms