Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
TTC39CQ8N584 AP002414.2-202ENST00000590929 1450 ntBASIC27.17■■□□□ 1.94
TTC39CQ8N584 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TTC39CQ8N584 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
TTC39CQ8N584 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TTC39CQ8N584 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
TTC39CQ8N584 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
TTC39CQ8N584 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC27.15■■□□□ 1.94
TTC39CQ8N584 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
TTC39CQ8N584 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
TTC39CQ8N584 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TTC39CQ8N584 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
TTC39CQ8N584 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.12■■□□□ 1.93
TTC39CQ8N584 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
TTC39CQ8N584 DRD5P2-201ENST00000421395 2012 ntBASIC27.12■■□□□ 1.93
TTC39CQ8N584 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TTC39CQ8N584 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC27.11■■□□□ 1.93
TTC39CQ8N584 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TTC39CQ8N584 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.11■■□□□ 1.93
TTC39CQ8N584 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TTC39CQ8N584 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TTC39CQ8N584 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
TTC39CQ8N584 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TTC39CQ8N584 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
TTC39CQ8N584 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.09■■□□□ 1.93
TTC39CQ8N584 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
TTC39CQ8N584 HES6-205ENST00000409356 528 ntTSL 2 BASIC27.09■■□□□ 1.93
TTC39CQ8N584 PEX7-203ENST00000541292 945 ntTSL 5 BASIC27.09■■□□□ 1.93
TTC39CQ8N584 MIR3648-2-201ENST00000581792 180 ntBASIC27.09■■□□□ 1.93
TTC39CQ8N584 MIR3648-1-201ENST00000615959 180 ntBASIC27.09■■□□□ 1.93
TTC39CQ8N584 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
TTC39CQ8N584 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC27.08■■□□□ 1.93
TTC39CQ8N584 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
TTC39CQ8N584 CR559946.2-201ENST00000623684 991 ntBASIC27.08■■□□□ 1.93
TTC39CQ8N584 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
TTC39CQ8N584 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC27.08■■□□□ 1.93
TTC39CQ8N584 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.07■■□□□ 1.92
TTC39CQ8N584 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
TTC39CQ8N584 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
TTC39CQ8N584 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
TTC39CQ8N584 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
TTC39CQ8N584 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.06■■□□□ 1.92
TTC39CQ8N584 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
TTC39CQ8N584 RPS2-210ENST00000530225 765 ntTSL 2 BASIC27.05■■□□□ 1.92
TTC39CQ8N584 AC008813.1-201ENST00000536597 885 ntBASIC27.05■■□□□ 1.92
TTC39CQ8N584 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
TTC39CQ8N584 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
TTC39CQ8N584 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
TTC39CQ8N584 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
TTC39CQ8N584 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC27.04■■□□□ 1.92
TTC39CQ8N584 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
TTC39CQ8N584 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
TTC39CQ8N584 PVT1-219ENST00000523427 938 ntTSL 3 BASIC27.03■■□□□ 1.92
TTC39CQ8N584 AC142086.6-201ENST00000621154 1765 ntBASIC27.03■■□□□ 1.92
TTC39CQ8N584 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
TTC39CQ8N584 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
TTC39CQ8N584 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC27.02■■□□□ 1.92
TTC39CQ8N584 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
TTC39CQ8N584 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
TTC39CQ8N584 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
TTC39CQ8N584 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
TTC39CQ8N584 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
TTC39CQ8N584 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
TTC39CQ8N584 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
TTC39CQ8N584 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
TTC39CQ8N584 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC27■■□□□ 1.91
TTC39CQ8N584 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27■■□□□ 1.91
TTC39CQ8N584 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC27■■□□□ 1.91
TTC39CQ8N584 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
TTC39CQ8N584 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
TTC39CQ8N584 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.99■■□□□ 1.91
TTC39CQ8N584 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
TTC39CQ8N584 AC016575.1-201ENST00000607026 382 ntBASIC26.99■■□□□ 1.91
TTC39CQ8N584 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
TTC39CQ8N584 AC018358.1-201ENST00000631079 1402 ntBASIC26.99■■□□□ 1.91
TTC39CQ8N584 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
TTC39CQ8N584 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
TTC39CQ8N584 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.97■■□□□ 1.91
TTC39CQ8N584 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
TTC39CQ8N584 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.96■■□□□ 1.91
TTC39CQ8N584 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
TTC39CQ8N584 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
TTC39CQ8N584 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
TTC39CQ8N584 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
TTC39CQ8N584 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
TTC39CQ8N584 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
TTC39CQ8N584 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.95■■□□□ 1.9
TTC39CQ8N584 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
TTC39CQ8N584 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
TTC39CQ8N584 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.94■■□□□ 1.9
TTC39CQ8N584 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
TTC39CQ8N584 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
TTC39CQ8N584 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
TTC39CQ8N584 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.93■■□□□ 1.9
TTC39CQ8N584 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
TTC39CQ8N584 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.93■■□□□ 1.9
TTC39CQ8N584 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
TTC39CQ8N584 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
TTC39CQ8N584 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.92■■□□□ 1.9
TTC39CQ8N584 MIR639-201ENST00000384974 98 ntBASIC26.92■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms