Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.93■■□□□ 1.9
RNF135Q8IUD6 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.93■■□□□ 1.9
RNF135Q8IUD6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RNF135Q8IUD6 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RNF135Q8IUD6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RNF135Q8IUD6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.93■■□□□ 1.9
RNF135Q8IUD6 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RNF135Q8IUD6 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
RNF135Q8IUD6 AC060814.1-201ENST00000554326 538 ntBASIC26.92■■□□□ 1.9
RNF135Q8IUD6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RNF135Q8IUD6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.91■■□□□ 1.9
RNF135Q8IUD6 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RNF135Q8IUD6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
RNF135Q8IUD6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.9■■□□□ 1.9
RNF135Q8IUD6 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
RNF135Q8IUD6 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RNF135Q8IUD6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.89■■□□□ 1.9
RNF135Q8IUD6 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
RNF135Q8IUD6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RNF135Q8IUD6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.88■■□□□ 1.89
RNF135Q8IUD6 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
RNF135Q8IUD6 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RNF135Q8IUD6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RNF135Q8IUD6 HES4-204ENST00000484667 667 ntTSL 3 BASIC26.87■■□□□ 1.89
RNF135Q8IUD6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.87■■□□□ 1.89
RNF135Q8IUD6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RNF135Q8IUD6 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RNF135Q8IUD6 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RNF135Q8IUD6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RNF135Q8IUD6 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RNF135Q8IUD6 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
RNF135Q8IUD6 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RNF135Q8IUD6 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RNF135Q8IUD6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
RNF135Q8IUD6 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
RNF135Q8IUD6 AC019069.1-201ENST00000610008 1333 ntBASIC26.84■■□□□ 1.89
RNF135Q8IUD6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.84■■□□□ 1.89
RNF135Q8IUD6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RNF135Q8IUD6 ABCB10P1-201ENST00000614297 2181 ntBASIC26.83■■□□□ 1.89
RNF135Q8IUD6 AL592295.1-201ENST00000400984 884 ntBASIC26.83■■□□□ 1.89
RNF135Q8IUD6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.83■■□□□ 1.89
RNF135Q8IUD6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
RNF135Q8IUD6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.82■■□□□ 1.88
RNF135Q8IUD6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RNF135Q8IUD6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.81■■□□□ 1.88
RNF135Q8IUD6 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.8■■□□□ 1.88
RNF135Q8IUD6 AL035685.1-201ENST00000636663 812 ntBASIC26.8■■□□□ 1.88
RNF135Q8IUD6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RNF135Q8IUD6 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RNF135Q8IUD6 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC26.79■■□□□ 1.88
RNF135Q8IUD6 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RNF135Q8IUD6 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RNF135Q8IUD6 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RNF135Q8IUD6 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC26.78■■□□□ 1.88
RNF135Q8IUD6 AL135925.1-201ENST00000605920 1701 ntBASIC26.77■■□□□ 1.88
RNF135Q8IUD6 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
RNF135Q8IUD6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.77■■□□□ 1.88
RNF135Q8IUD6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.77■■□□□ 1.88
RNF135Q8IUD6 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.76■■□□□ 1.87
RNF135Q8IUD6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.76■■□□□ 1.87
RNF135Q8IUD6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC26.76■■□□□ 1.87
RNF135Q8IUD6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RNF135Q8IUD6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RNF135Q8IUD6 AC092296.2-201ENST00000589470 999 ntBASIC26.75■■□□□ 1.87
RNF135Q8IUD6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RNF135Q8IUD6 AC010864.1-201ENST00000609407 1511 ntBASIC26.75■■□□□ 1.87
RNF135Q8IUD6 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
RNF135Q8IUD6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.74■■□□□ 1.87
RNF135Q8IUD6 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC26.74■■□□□ 1.87
RNF135Q8IUD6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.74■■□□□ 1.87
RNF135Q8IUD6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
RNF135Q8IUD6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
RNF135Q8IUD6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
RNF135Q8IUD6 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RNF135Q8IUD6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
RNF135Q8IUD6 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RNF135Q8IUD6 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC26.73■■□□□ 1.87
RNF135Q8IUD6 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC26.73■■□□□ 1.87
RNF135Q8IUD6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RNF135Q8IUD6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RNF135Q8IUD6 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.72■■□□□ 1.87
RNF135Q8IUD6 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RNF135Q8IUD6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RNF135Q8IUD6 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
RNF135Q8IUD6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC26.72■■□□□ 1.87
RNF135Q8IUD6 AC148477.6-201ENST00000623746 465 ntBASIC26.72■■□□□ 1.87
RNF135Q8IUD6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RNF135Q8IUD6 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RNF135Q8IUD6 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RNF135Q8IUD6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
RNF135Q8IUD6 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.71■■□□□ 1.87
RNF135Q8IUD6 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
RNF135Q8IUD6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.7■■□□□ 1.87
RNF135Q8IUD6 AL451085.2-201ENST00000605085 799 ntBASIC26.7■■□□□ 1.86
RNF135Q8IUD6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
RNF135Q8IUD6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.86
RNF135Q8IUD6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RNF135Q8IUD6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.69■■□□□ 1.86
RNF135Q8IUD6 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
RNF135Q8IUD6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms