Protein–RNA interactions for Protein: Q86YD7

FAM90A1, Protein FAM90A1, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1Q86YD7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
FAM90A1Q86YD7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.41■■□□□ 1.02
FAM90A1Q86YD7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
FAM90A1Q86YD7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FAM90A1Q86YD7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
FAM90A1Q86YD7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FAM90A1Q86YD7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.41■■□□□ 1.02
FAM90A1Q86YD7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
FAM90A1Q86YD7 AP002414.2-202ENST00000590929 1450 ntBASIC21.4■■□□□ 1.02
FAM90A1Q86YD7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FAM90A1Q86YD7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.4■■□□□ 1.02
FAM90A1Q86YD7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
FAM90A1Q86YD7 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.4■■□□□ 1.02
FAM90A1Q86YD7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
FAM90A1Q86YD7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.39■■□□□ 1.01
FAM90A1Q86YD7 DUX4L13-201ENST00000554103 1267 ntBASIC21.39■■□□□ 1.01
FAM90A1Q86YD7 DUX4L15-201ENST00000611059 1267 ntBASIC21.39■■□□□ 1.01
FAM90A1Q86YD7 DUX4L23-201ENST00000615195 1269 ntBASIC21.39■■□□□ 1.01
FAM90A1Q86YD7 DUX4L24-201ENST00000617576 1269 ntBASIC21.39■■□□□ 1.01
FAM90A1Q86YD7 DUX4L22-201ENST00000618238 1269 ntBASIC21.39■■□□□ 1.01
FAM90A1Q86YD7 DUX4L20-201ENST00000619712 1269 ntBASIC21.39■■□□□ 1.01
FAM90A1Q86YD7 DUX4L21-201ENST00000622058 1269 ntBASIC21.39■■□□□ 1.01
FAM90A1Q86YD7 DUX4L10-201ENST00000622460 1267 ntBASIC21.39■■□□□ 1.01
FAM90A1Q86YD7 DUX4L25-201ENST00000624915 1269 ntBASIC21.39■■□□□ 1.01
FAM90A1Q86YD7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.39■■□□□ 1.01
FAM90A1Q86YD7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
FAM90A1Q86YD7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FAM90A1Q86YD7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.38■■□□□ 1.01
FAM90A1Q86YD7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
FAM90A1Q86YD7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
FAM90A1Q86YD7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
FAM90A1Q86YD7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
FAM90A1Q86YD7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
FAM90A1Q86YD7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
FAM90A1Q86YD7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
FAM90A1Q86YD7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.36■■□□□ 1.01
FAM90A1Q86YD7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.36■■□□□ 1.01
FAM90A1Q86YD7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
FAM90A1Q86YD7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.35■■□□□ 1.01
FAM90A1Q86YD7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.35■■□□□ 1.01
FAM90A1Q86YD7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.35■■□□□ 1.01
FAM90A1Q86YD7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.35■■□□□ 1.01
FAM90A1Q86YD7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
FAM90A1Q86YD7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
FAM90A1Q86YD7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
FAM90A1Q86YD7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.34■■□□□ 1.01
FAM90A1Q86YD7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
FAM90A1Q86YD7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
FAM90A1Q86YD7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
FAM90A1Q86YD7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.33■■□□□ 1.01
FAM90A1Q86YD7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.33■■□□□ 1.01
FAM90A1Q86YD7 AC110285.7-201ENST00000624417 1536 ntBASIC21.33■■□□□ 1
FAM90A1Q86YD7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
FAM90A1Q86YD7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.32■■□□□ 1
FAM90A1Q86YD7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
FAM90A1Q86YD7 CR559946.2-201ENST00000623684 991 ntBASIC21.32■■□□□ 1
FAM90A1Q86YD7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
FAM90A1Q86YD7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.32■■□□□ 1
FAM90A1Q86YD7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
FAM90A1Q86YD7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
FAM90A1Q86YD7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
FAM90A1Q86YD7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.31■■□□□ 1
FAM90A1Q86YD7 MIR3648-2-201ENST00000581792 180 ntBASIC21.31■■□□□ 1
FAM90A1Q86YD7 MIR3648-1-201ENST00000615959 180 ntBASIC21.31■■□□□ 1
FAM90A1Q86YD7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
FAM90A1Q86YD7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
FAM90A1Q86YD7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.3■■□□□ 1
FAM90A1Q86YD7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.3■■□□□ 1
FAM90A1Q86YD7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FAM90A1Q86YD7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.3■■□□□ 1
FAM90A1Q86YD7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
FAM90A1Q86YD7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FAM90A1Q86YD7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FAM90A1Q86YD7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
FAM90A1Q86YD7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
FAM90A1Q86YD7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.29■■□□□ 1
FAM90A1Q86YD7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
FAM90A1Q86YD7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.28■■□□□ 1
FAM90A1Q86YD7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.28■■□□□ 1
FAM90A1Q86YD7 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.28■■□□□ 1
FAM90A1Q86YD7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.28■■□□□ 1
FAM90A1Q86YD7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.28■■□□□ 1
FAM90A1Q86YD7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
FAM90A1Q86YD7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
FAM90A1Q86YD7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FAM90A1Q86YD7 AC016575.1-201ENST00000607026 382 ntBASIC21.27■■□□□ 1
FAM90A1Q86YD7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.27■■□□□ 1
FAM90A1Q86YD7 AC018358.1-201ENST00000631079 1402 ntBASIC21.27■■□□□ 1
FAM90A1Q86YD7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
FAM90A1Q86YD7 BX255925.1-201ENST00000566954 1854 ntBASIC21.26■□□□□ 0.99
FAM90A1Q86YD7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FAM90A1Q86YD7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
FAM90A1Q86YD7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FAM90A1Q86YD7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
FAM90A1Q86YD7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FAM90A1Q86YD7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
FAM90A1Q86YD7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.24■□□□□ 0.99
FAM90A1Q86YD7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FAM90A1Q86YD7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FAM90A1Q86YD7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms