Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF20Q53R12 ZNRF2P2-203ENST00000454624 420 ntBASIC19.56■□□□□ 0.72
TM4SF20Q53R12 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TM4SF20Q53R12 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF20Q53R12 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.56■□□□□ 0.72
TM4SF20Q53R12 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF20Q53R12 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TM4SF20Q53R12 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TM4SF20Q53R12 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM4SF20Q53R12 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TM4SF20Q53R12 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.55■□□□□ 0.72
TM4SF20Q53R12 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.55■□□□□ 0.72
TM4SF20Q53R12 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.55■□□□□ 0.72
TM4SF20Q53R12 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TM4SF20Q53R12 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.54■□□□□ 0.72
TM4SF20Q53R12 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.54■□□□□ 0.72
TM4SF20Q53R12 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM4SF20Q53R12 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
TM4SF20Q53R12 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TM4SF20Q53R12 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TM4SF20Q53R12 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF20Q53R12 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF20Q53R12 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.52■□□□□ 0.72
TM4SF20Q53R12 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF20Q53R12 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.52■□□□□ 0.72
TM4SF20Q53R12 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF20Q53R12 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF20Q53R12 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
TM4SF20Q53R12 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.52■□□□□ 0.71
TM4SF20Q53R12 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TM4SF20Q53R12 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TM4SF20Q53R12 DRD5P2-201ENST00000421395 2012 ntBASIC19.51■□□□□ 0.71
TM4SF20Q53R12 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.5■□□□□ 0.71
TM4SF20Q53R12 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TM4SF20Q53R12 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TM4SF20Q53R12 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TM4SF20Q53R12 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF20Q53R12 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TM4SF20Q53R12 LINC01971-201ENST00000617888 1048 ntBASIC19.49■□□□□ 0.71
TM4SF20Q53R12 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF20Q53R12 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TM4SF20Q53R12 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.48■□□□□ 0.71
TM4SF20Q53R12 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TM4SF20Q53R12 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TM4SF20Q53R12 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TM4SF20Q53R12 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.48■□□□□ 0.71
TM4SF20Q53R12 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TM4SF20Q53R12 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TM4SF20Q53R12 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM4SF20Q53R12 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.47■□□□□ 0.71
TM4SF20Q53R12 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TM4SF20Q53R12 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TM4SF20Q53R12 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM4SF20Q53R12 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM4SF20Q53R12 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TM4SF20Q53R12 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TM4SF20Q53R12 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM4SF20Q53R12 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM4SF20Q53R12 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.45■□□□□ 0.7
TM4SF20Q53R12 MIR7108-201ENST00000614319 87 ntBASIC19.45■□□□□ 0.7
TM4SF20Q53R12 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM4SF20Q53R12 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM4SF20Q53R12 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.44■□□□□ 0.7
TM4SF20Q53R12 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM4SF20Q53R12 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TM4SF20Q53R12 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.44■□□□□ 0.7
TM4SF20Q53R12 DUX4L11-201ENST00000611504 1267 ntBASIC19.44■□□□□ 0.7
TM4SF20Q53R12 DUX4L12-201ENST00000614593 1267 ntBASIC19.44■□□□□ 0.7
TM4SF20Q53R12 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.44■□□□□ 0.7
TM4SF20Q53R12 DUX4L14-201ENST00000621227 1267 ntBASIC19.44■□□□□ 0.7
TM4SF20Q53R12 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM4SF20Q53R12 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TM4SF20Q53R12 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.43■□□□□ 0.7
TM4SF20Q53R12 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.43■□□□□ 0.7
TM4SF20Q53R12 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.43■□□□□ 0.7
TM4SF20Q53R12 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TM4SF20Q53R12 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF20Q53R12 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.42■□□□□ 0.7
TM4SF20Q53R12 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF20Q53R12 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.42■□□□□ 0.7
TM4SF20Q53R12 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.42■□□□□ 0.7
TM4SF20Q53R12 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM4SF20Q53R12 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.42■□□□□ 0.7
TM4SF20Q53R12 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF20Q53R12 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF20Q53R12 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF20Q53R12 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TM4SF20Q53R12 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF20Q53R12 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF20Q53R12 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TM4SF20Q53R12 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF20Q53R12 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF20Q53R12 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF20Q53R12 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF20Q53R12 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF20Q53R12 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF20Q53R12 AC110285.7-201ENST00000624417 1536 ntBASIC19.41■□□□□ 0.7
TM4SF20Q53R12 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
TM4SF20Q53R12 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.4■□□□□ 0.7
TM4SF20Q53R12 AC142086.6-201ENST00000621154 1765 ntBASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms