Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 GUSBP5-201ENST00000418136 578 ntBASIC25.12■■□□□ 1.61
RSPO4Q2I0M5 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
RSPO4Q2I0M5 RP9P-202ENST00000450133 1212 ntBASIC25.11■■□□□ 1.61
RSPO4Q2I0M5 BHLHE23-202ENST00000612929 1109 ntBASIC25.11■■□□□ 1.61
RSPO4Q2I0M5 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
RSPO4Q2I0M5 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.1■■□□□ 1.61
RSPO4Q2I0M5 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.1■■□□□ 1.61
RSPO4Q2I0M5 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC25.1■■□□□ 1.61
RSPO4Q2I0M5 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RSPO4Q2I0M5 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC25.1■■□□□ 1.61
RSPO4Q2I0M5 AC133552.2-201ENST00000619106 1032 ntBASIC25.1■■□□□ 1.61
RSPO4Q2I0M5 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RSPO4Q2I0M5 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RSPO4Q2I0M5 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RSPO4Q2I0M5 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.09■■□□□ 1.61
RSPO4Q2I0M5 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
RSPO4Q2I0M5 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RSPO4Q2I0M5 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RSPO4Q2I0M5 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RSPO4Q2I0M5 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
RSPO4Q2I0M5 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.07■■□□□ 1.6
RSPO4Q2I0M5 OR2A1-AS1-204ENST00000470435 602 ntBASIC25.07■■□□□ 1.6
RSPO4Q2I0M5 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC25.07■■□□□ 1.6
RSPO4Q2I0M5 AC010980.1-201ENST00000587192 1142 ntBASIC25.07■■□□□ 1.6
RSPO4Q2I0M5 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RSPO4Q2I0M5 AC009831.1-201ENST00000580420 1582 ntBASIC25.06■■□□□ 1.6
RSPO4Q2I0M5 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RSPO4Q2I0M5 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RSPO4Q2I0M5 AC025884.2-201ENST00000553429 711 ntBASIC25.06■■□□□ 1.6
RSPO4Q2I0M5 MIR219A2-201ENST00000608502 1504 ntBASIC25.06■■□□□ 1.6
RSPO4Q2I0M5 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC25.05■■□□□ 1.6
RSPO4Q2I0M5 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC25.05■■□□□ 1.6
RSPO4Q2I0M5 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
RSPO4Q2I0M5 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RSPO4Q2I0M5 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RSPO4Q2I0M5 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.04■■□□□ 1.6
RSPO4Q2I0M5 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.04■■□□□ 1.6
RSPO4Q2I0M5 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RSPO4Q2I0M5 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
RSPO4Q2I0M5 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.03■■□□□ 1.6
RSPO4Q2I0M5 AC007029.1-201ENST00000604183 313 ntBASIC25.03■■□□□ 1.6
RSPO4Q2I0M5 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.03■■□□□ 1.6
RSPO4Q2I0M5 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RSPO4Q2I0M5 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.02■■□□□ 1.6
RSPO4Q2I0M5 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC25.02■■□□□ 1.6
RSPO4Q2I0M5 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
RSPO4Q2I0M5 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.02■■□□□ 1.6
RSPO4Q2I0M5 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RSPO4Q2I0M5 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RSPO4Q2I0M5 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RSPO4Q2I0M5 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RSPO4Q2I0M5 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RSPO4Q2I0M5 YBX1P4-201ENST00000392794 808 ntBASIC25■■□□□ 1.59
RSPO4Q2I0M5 AL356441.2-201ENST00000443009 864 ntBASIC25■■□□□ 1.59
RSPO4Q2I0M5 AC126177.7-201ENST00000547904 679 ntBASIC25■■□□□ 1.59
RSPO4Q2I0M5 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RSPO4Q2I0M5 AC110285.7-201ENST00000624417 1536 ntBASIC25■■□□□ 1.59
RSPO4Q2I0M5 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC25■■□□□ 1.59
RSPO4Q2I0M5 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RSPO4Q2I0M5 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
RSPO4Q2I0M5 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RSPO4Q2I0M5 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.98■■□□□ 1.59
RSPO4Q2I0M5 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.98■■□□□ 1.59
RSPO4Q2I0M5 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.98■■□□□ 1.59
RSPO4Q2I0M5 AC074183.2-201ENST00000623112 922 ntBASIC24.98■■□□□ 1.59
RSPO4Q2I0M5 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RSPO4Q2I0M5 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC24.97■■□□□ 1.59
RSPO4Q2I0M5 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RSPO4Q2I0M5 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
RSPO4Q2I0M5 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC24.96■■□□□ 1.59
RSPO4Q2I0M5 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
RSPO4Q2I0M5 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.95■■□□□ 1.58
RSPO4Q2I0M5 AC008406.3-201ENST00000620001 1374 ntBASIC24.93■■□□□ 1.58
RSPO4Q2I0M5 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.93■■□□□ 1.58
RSPO4Q2I0M5 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC24.93■■□□□ 1.58
RSPO4Q2I0M5 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RSPO4Q2I0M5 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RSPO4Q2I0M5 AL157400.5-201ENST00000507624 621 ntBASIC24.93■■□□□ 1.58
RSPO4Q2I0M5 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.93■■□□□ 1.58
RSPO4Q2I0M5 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC24.93■■□□□ 1.58
RSPO4Q2I0M5 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.93■■□□□ 1.58
RSPO4Q2I0M5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.93■■□□□ 1.58
RSPO4Q2I0M5 WHAMMP2-203ENST00000563942 1603 ntBASIC24.93■■□□□ 1.58
RSPO4Q2I0M5 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RSPO4Q2I0M5 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.92■■□□□ 1.58
RSPO4Q2I0M5 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RSPO4Q2I0M5 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
RSPO4Q2I0M5 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
RSPO4Q2I0M5 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
RSPO4Q2I0M5 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
RSPO4Q2I0M5 DUX4L9-201ENST00000449051 1259 ntBASIC24.91■■□□□ 1.58
RSPO4Q2I0M5 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.91■■□□□ 1.58
RSPO4Q2I0M5 AC103834.1-201ENST00000520383 144 ntBASIC24.91■■□□□ 1.58
RSPO4Q2I0M5 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC24.91■■□□□ 1.58
RSPO4Q2I0M5 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC24.91■■□□□ 1.58
RSPO4Q2I0M5 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.89■■□□□ 1.58
RSPO4Q2I0M5 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
RSPO4Q2I0M5 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.89■■□□□ 1.58
RSPO4Q2I0M5 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.89■■□□□ 1.58
RSPO4Q2I0M5 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms