Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 JHD1YER051W 1479 nt8.32□□□□□ -1.08
VPS38Q05919 SNA3YJL151C 402 nt8.31□□□□□ -1.08
VPS38Q05919 PAU19YMR325W 375 nt8.31□□□□□ -1.08
VPS38Q05919 BXI1YNL305C 894 nt8.31□□□□□ -1.08
VPS38Q05919 MNN9YPL050C 1188 nt8.31□□□□□ -1.08
VPS38Q05919 PET18YCR020C 648 nt8.3□□□□□ -1.08
VPS38Q05919 YJR154WYJR154W 1041 nt8.3□□□□□ -1.08
VPS38Q05919 YLR030WYLR030W 792 nt8.3□□□□□ -1.08
VPS38Q05919 ARG7YMR062C 1326 nt8.29□□□□□ -1.08
VPS38Q05919 LAS17YOR181W 1902 nt8.29□□□□□ -1.08
VPS38Q05919 RPS6AYPL090C 711 nt8.29□□□□□ -1.08
VPS38Q05919 RPS6BYBR181C 711 nt8.29□□□□□ -1.08
VPS38Q05919 RCF2YNR018W 675 nt8.28□□□□□ -1.08
VPS38Q05919 LEO1YOR123C 1395 nt8.27□□□□□ -1.09
VPS38Q05919 PMU1YKL128C 888 nt8.26□□□□□ -1.09
VPS38Q05919 ERG6YML008C 1152 nt8.26□□□□□ -1.09
VPS38Q05919 YBL113CYBL113C 2379 nt8.25□□□□□ -1.09
VPS38Q05919 FRA1YLL029W 2250 nt8.24□□□□□ -1.09
VPS38Q05919 YER156CYER156C 1017 nt8.24□□□□□ -1.09
VPS38Q05919 NAP1YKR048C 1254 nt8.24□□□□□ -1.09
VPS38Q05919 ATP10YLR393W 840 nt8.24□□□□□ -1.09
VPS38Q05919 YMR206WYMR206W 942 nt8.24□□□□□ -1.09
VPS38Q05919 YJL160CYJL160C 864 nt8.23□□□□□ -1.09
VPS38Q05919 VPS65YLR322W 315 nt8.23□□□□□ -1.09
VPS38Q05919 YPR084WYPR084W 1371 nt8.22□□□□□ -1.09
VPS38Q05919 SWM1YDR260C 513 nt8.22□□□□□ -1.09
VPS38Q05919 GNA1YFL017C 480 nt8.22□□□□□ -1.09
VPS38Q05919 YHR033WYHR033W 1272 nt8.22□□□□□ -1.09
VPS38Q05919 MAL31YBR298C 1845 nt8.22□□□□□ -1.09
VPS38Q05919 TOP3YLR234W 1971 nt8.21□□□□□ -1.09
VPS38Q05919 ERV25YML012W 636 nt8.21□□□□□ -1.1
VPS38Q05919 ERR3YMR323W 1314 nt8.21□□□□□ -1.1
VPS38Q05919 ERR1YOR393W 1314 nt8.21□□□□□ -1.1
VPS38Q05919 ERR2YPL281C 1314 nt8.21□□□□□ -1.1
VPS38Q05919 ATP2YJR121W 1536 nt8.2□□□□□ -1.1
VPS38Q05919 CPR2YHR057C 618 nt8.2□□□□□ -1.1
VPS38Q05919 PET10YKR046C 852 nt8.2□□□□□ -1.1
VPS38Q05919 YMR253CYMR253C 1245 nt8.2□□□□□ -1.1
VPS38Q05919 YOR041CYOR041C 432 nt8.2□□□□□ -1.1
VPS38Q05919 SAM50YNL026W 1455 nt8.19□□□□□ -1.1
VPS38Q05919 YER152W-AYER152W-A 567 nt8.19□□□□□ -1.1
VPS38Q05919 DCR2YLR361C 1737 nt8.19□□□□□ -1.1
VPS38Q05919 YDR306CYDR306C 1437 nt8.16□□□□□ -1.1
VPS38Q05919 HNM1YGL077C 1692 nt8.16□□□□□ -1.1
VPS38Q05919 SNF7YLR025W 723 nt8.16□□□□□ -1.1
VPS38Q05919 YPC1YBR183W 951 nt8.16□□□□□ -1.1
VPS38Q05919 YKR018CYKR018C 2178 nt8.15□□□□□ -1.1
VPS38Q05919 TPI1YDR050C 747 nt8.15□□□□□ -1.1
VPS38Q05919 YDR215CYDR215C 414 nt8.15□□□□□ -1.1
VPS38Q05919 UTR5YEL035C 501 nt8.15□□□□□ -1.1
VPS38Q05919 YJL043WYJL043W 774 nt8.15□□□□□ -1.1
VPS38Q05919 YCP4YCR004C 744 nt8.14□□□□□ -1.11
VPS38Q05919 CAR2YLR438W 1275 nt8.14□□□□□ -1.11
VPS38Q05919 TCB1YOR086C 3561 nt8.14□□□□□ -1.11
VPS38Q05919 YIL168WYIL168W 384 nt8.13□□□□□ -1.11
VPS38Q05919 MFT1YML062C 1179 nt8.13□□□□□ -1.11
VPS38Q05919 APT1YML022W 564 nt8.12□□□□□ -1.11
VPS38Q05919 YMR007WYMR007W 381 nt8.12□□□□□ -1.11
VPS38Q05919 CDC23YHR166C 1881 nt8.12□□□□□ -1.11
VPS38Q05919 STE3YKL178C 1413 nt8.12□□□□□ -1.11
VPS38Q05919 DAL80YKR034W 810 nt8.11□□□□□ -1.11
VPS38Q05919 YML034C-AYML034C-A 399 nt8.11□□□□□ -1.11
VPS38Q05919 SLG1YOR008C 1137 nt8.11□□□□□ -1.11
VPS38Q05919 MET8YBR213W 825 nt8.11□□□□□ -1.11
VPS38Q05919 CKI1YLR133W 1749 nt8.11□□□□□ -1.11
VPS38Q05919 POB3YML069W 1659 nt8.11□□□□□ -1.11
VPS38Q05919 RMD8YFR048W 1989 nt8.1□□□□□ -1.11
VPS38Q05919 YER137CYER137C 447 nt8.1□□□□□ -1.11
VPS38Q05919 GTS1YGL181W 1191 nt8.1□□□□□ -1.11
VPS38Q05919 PUP1YOR157C 786 nt8.1□□□□□ -1.11
VPS38Q05919 RTC2YBR147W 891 nt8.1□□□□□ -1.11
VPS38Q05919 PRB1YEL060C 1908 nt8.09□□□□□ -1.11
VPS38Q05919 RPL12BYDR418W 498 nt8.09□□□□□ -1.11
VPS38Q05919 YNL295WYNL295W 1575 nt8.09□□□□□ -1.11
VPS38Q05919 AQR1YNL065W 1761 nt8.08□□□□□ -1.12
VPS38Q05919 SEC24YIL109C 2781 nt8.08□□□□□ -1.12
VPS38Q05919 YAH1YPL252C 519 nt8.07□□□□□ -1.12
VPS38Q05919 ALR1YOL130W 2580 nt8.07□□□□□ -1.12
VPS38Q05919 NSG2YNL156C 900 nt8.06□□□□□ -1.12
VPS38Q05919 GNP1YDR508C 1992 nt8.06□□□□□ -1.12
VPS38Q05919 FLC2YAL053W 2352 nt8.05□□□□□ -1.12
VPS38Q05919 RCR1YBR005W 642 nt8.05□□□□□ -1.12
VPS38Q05919 MSS51YLR203C 1311 nt8.04□□□□□ -1.12
VPS38Q05919 RRP43YCR035C 1185 nt8.04□□□□□ -1.12
VPS38Q05919 INP54YOL065C 1155 nt8.04□□□□□ -1.12
VPS38Q05919 TOD6YBL054W 1578 nt8.04□□□□□ -1.12
VPS38Q05919 PUS7YOR243C 2031 nt8.03□□□□□ -1.12
VPS38Q05919 CAN1YEL063C 1773 nt8.03□□□□□ -1.12
VPS38Q05919 GGC1YDL198C 903 nt8.03□□□□□ -1.12
VPS38Q05919 YDR327WYDR327W 327 nt8.03□□□□□ -1.12
VPS38Q05919 PRY2YKR013W 990 nt8.03□□□□□ -1.12
VPS38Q05919 BNA3YJL060W 1335 nt8.03□□□□□ -1.12
VPS38Q05919 OPI1YHL020C 1215 nt8.02□□□□□ -1.13
VPS38Q05919 TDH1YJL052W 999 nt8.02□□□□□ -1.13
VPS38Q05919 YGL260WYGL260W 231 nt8.01□□□□□ -1.13
VPS38Q05919 ADA2YDR448W 1305 nt8.01□□□□□ -1.13
VPS38Q05919 GET2YER083C 858 nt8□□□□□ -1.13
VPS38Q05919 YKL147CYKL147C 618 nt8□□□□□ -1.13
VPS38Q05919 FRT1YOR324C 1809 nt8□□□□□ -1.13
VPS38Q05919 BDS1YOL164W 1941 nt7.99□□□□□ -1.13
Retrieved 100 of 7,029 protein–RNA pairs in 11.4 ms