Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC30.66■■■□□ 2.5
HTRA3P83110 BHLHE23-202ENST00000612929 1109 ntBASIC30.66■■■□□ 2.5
HTRA3P83110 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
HTRA3P83110 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC30.65■■■□□ 2.5
HTRA3P83110 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC30.65■■■□□ 2.5
HTRA3P83110 AC009831.1-201ENST00000580420 1582 ntBASIC30.63■■■□□ 2.49
HTRA3P83110 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
HTRA3P83110 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
HTRA3P83110 AC133552.2-201ENST00000619106 1032 ntBASIC30.63■■■□□ 2.49
HTRA3P83110 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC30.63■■■□□ 2.49
HTRA3P83110 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC30.62■■■□□ 2.49
HTRA3P83110 AC008406.3-201ENST00000620001 1374 ntBASIC30.62■■■□□ 2.49
HTRA3P83110 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC30.61■■■□□ 2.49
HTRA3P83110 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
HTRA3P83110 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC30.61■■■□□ 2.49
HTRA3P83110 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
HTRA3P83110 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
HTRA3P83110 AC103834.1-201ENST00000520383 144 ntBASIC30.59■■■□□ 2.49
HTRA3P83110 AC148477.6-201ENST00000623746 465 ntBASIC30.59■■■□□ 2.49
HTRA3P83110 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
HTRA3P83110 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
HTRA3P83110 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
HTRA3P83110 MOB2-207ENST00000614710 705 ntTSL 5 BASIC30.58■■■□□ 2.49
HTRA3P83110 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC30.57■■■□□ 2.48
HTRA3P83110 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
HTRA3P83110 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC30.56■■■□□ 2.48
HTRA3P83110 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
HTRA3P83110 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
HTRA3P83110 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC30.54■■■□□ 2.48
HTRA3P83110 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC30.54■■■□□ 2.48
HTRA3P83110 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC30.53■■■□□ 2.48
HTRA3P83110 BEX3-202ENST00000372634 753 ntTSL 2 BASIC30.53■■■□□ 2.48
HTRA3P83110 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC30.52■■■□□ 2.48
HTRA3P83110 MIR638-201ENST00000385237 100 ntBASIC30.52■■■□□ 2.48
HTRA3P83110 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC30.52■■■□□ 2.48
HTRA3P83110 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
HTRA3P83110 YBX1P4-201ENST00000392794 808 ntBASIC30.51■■■□□ 2.47
HTRA3P83110 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
HTRA3P83110 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC30.51■■■□□ 2.47
HTRA3P83110 AC007029.1-201ENST00000604183 313 ntBASIC30.51■■■□□ 2.47
HTRA3P83110 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC30.5■■■□□ 2.47
HTRA3P83110 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC30.5■■■□□ 2.47
HTRA3P83110 MIR219A2-201ENST00000608502 1504 ntBASIC30.5■■■□□ 2.47
HTRA3P83110 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
HTRA3P83110 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
HTRA3P83110 DUX4L9-201ENST00000449051 1259 ntBASIC30.48■■■□□ 2.47
HTRA3P83110 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC30.48■■■□□ 2.47
HTRA3P83110 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
HTRA3P83110 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
HTRA3P83110 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
HTRA3P83110 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC30.47■■■□□ 2.47
HTRA3P83110 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
HTRA3P83110 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC30.45■■■□□ 2.47
HTRA3P83110 AL157400.5-201ENST00000507624 621 ntBASIC30.45■■■□□ 2.47
HTRA3P83110 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC30.45■■■□□ 2.46
HTRA3P83110 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
HTRA3P83110 PEMT-206ENST00000435340 960 ntTSL 5 BASIC30.44■■■□□ 2.46
HTRA3P83110 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC30.43■■■□□ 2.46
HTRA3P83110 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC30.43■■■□□ 2.46
HTRA3P83110 PVT1_1.1-201ENST00000615125 194 ntBASIC30.43■■■□□ 2.46
HTRA3P83110 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
HTRA3P83110 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.41■■■□□ 2.46
HTRA3P83110 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
HTRA3P83110 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
HTRA3P83110 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC30.4■■■□□ 2.46
HTRA3P83110 AC092666.2-201ENST00000613287 246 ntBASIC30.4■■■□□ 2.46
HTRA3P83110 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
HTRA3P83110 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
HTRA3P83110 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
HTRA3P83110 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
HTRA3P83110 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
HTRA3P83110 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC30.38■■■□□ 2.45
HTRA3P83110 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC30.38■■■□□ 2.45
HTRA3P83110 MED25-210ENST00000612854 801 ntTSL 5 BASIC30.38■■■□□ 2.45
HTRA3P83110 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
HTRA3P83110 MED25-214ENST00000622402 642 ntTSL 5 BASIC30.38■■■□□ 2.45
HTRA3P83110 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
HTRA3P83110 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
HTRA3P83110 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
HTRA3P83110 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC30.37■■■□□ 2.45
HTRA3P83110 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC30.37■■■□□ 2.45
HTRA3P83110 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
HTRA3P83110 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC30.36■■■□□ 2.45
HTRA3P83110 AC110285.7-201ENST00000624417 1536 ntBASIC30.36■■■□□ 2.45
HTRA3P83110 RPS2-210ENST00000530225 765 ntTSL 2 BASIC30.35■■■□□ 2.45
HTRA3P83110 PRTG-204ENST00000561292 833 ntTSL 3 BASIC30.35■■■□□ 2.45
HTRA3P83110 AC074183.2-201ENST00000623112 922 ntBASIC30.35■■■□□ 2.45
HTRA3P83110 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
HTRA3P83110 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC30.33■■■□□ 2.45
HTRA3P83110 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC30.33■■■□□ 2.45
HTRA3P83110 WHAMMP2-203ENST00000563942 1603 ntBASIC30.33■■■□□ 2.45
HTRA3P83110 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
HTRA3P83110 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC30.32■■■□□ 2.44
HTRA3P83110 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
HTRA3P83110 SPCS2P3-201ENST00000500401 656 ntBASIC30.32■■■□□ 2.44
HTRA3P83110 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
HTRA3P83110 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
HTRA3P83110 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC30.32■■■□□ 2.44
HTRA3P83110 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.44
HTRA3P83110 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC30.32■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms