Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDKN1AP38936 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.71■■□□□ 1.07
CDKN1AP38936 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDKN1AP38936 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.7■■□□□ 1.06
CDKN1AP38936 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.7■■□□□ 1.06
CDKN1AP38936 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDKN1AP38936 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDKN1AP38936 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDKN1AP38936 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDKN1AP38936 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDKN1AP38936 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDKN1AP38936 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDKN1AP38936 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CDKN1AP38936 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CDKN1AP38936 AC148477.6-201ENST00000623746 465 ntBASIC21.68■■□□□ 1.06
CDKN1AP38936 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CDKN1AP38936 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.68■■□□□ 1.06
CDKN1AP38936 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.66■■□□□ 1.06
CDKN1AP38936 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDKN1AP38936 NTF6A-201ENST00000591175 560 ntBASIC21.66■■□□□ 1.06
CDKN1AP38936 MIR219A2-201ENST00000608502 1504 ntBASIC21.65■■□□□ 1.06
CDKN1AP38936 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.65■■□□□ 1.06
CDKN1AP38936 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDKN1AP38936 AC060814.1-201ENST00000554326 538 ntBASIC21.65■■□□□ 1.06
CDKN1AP38936 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.65■■□□□ 1.06
CDKN1AP38936 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDKN1AP38936 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDKN1AP38936 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDKN1AP38936 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.64■■□□□ 1.05
CDKN1AP38936 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
CDKN1AP38936 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.64■■□□□ 1.05
CDKN1AP38936 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.64■■□□□ 1.05
CDKN1AP38936 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CDKN1AP38936 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.64■■□□□ 1.05
CDKN1AP38936 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDKN1AP38936 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CDKN1AP38936 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDKN1AP38936 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDKN1AP38936 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CDKN1AP38936 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.63■■□□□ 1.05
CDKN1AP38936 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDKN1AP38936 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDKN1AP38936 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.62■■□□□ 1.05
CDKN1AP38936 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDKN1AP38936 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CDKN1AP38936 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.62■■□□□ 1.05
CDKN1AP38936 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CDKN1AP38936 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDKN1AP38936 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDKN1AP38936 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC21.61■■□□□ 1.05
CDKN1AP38936 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.61■■□□□ 1.05
CDKN1AP38936 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDKN1AP38936 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDKN1AP38936 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDKN1AP38936 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDKN1AP38936 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDKN1AP38936 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDKN1AP38936 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDKN1AP38936 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.6■■□□□ 1.05
CDKN1AP38936 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDKN1AP38936 AC012354.3-201ENST00000623734 483 ntBASIC21.59■■□□□ 1.05
CDKN1AP38936 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDKN1AP38936 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.59■■□□□ 1.05
CDKN1AP38936 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDKN1AP38936 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDKN1AP38936 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.58■■□□□ 1.04
CDKN1AP38936 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDKN1AP38936 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.57■■□□□ 1.04
CDKN1AP38936 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDKN1AP38936 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDKN1AP38936 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDKN1AP38936 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDKN1AP38936 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.56■■□□□ 1.04
CDKN1AP38936 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDKN1AP38936 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CDKN1AP38936 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.56■■□□□ 1.04
CDKN1AP38936 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.55■■□□□ 1.04
CDKN1AP38936 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDKN1AP38936 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.55■■□□□ 1.04
CDKN1AP38936 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDKN1AP38936 ST7-AS1-201ENST00000456775 1889 ntBASIC21.55■■□□□ 1.04
CDKN1AP38936 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDKN1AP38936 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDKN1AP38936 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.54■■□□□ 1.04
CDKN1AP38936 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDKN1AP38936 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.54■■□□□ 1.04
CDKN1AP38936 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.54■■□□□ 1.04
CDKN1AP38936 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDKN1AP38936 U85056.1-201ENST00000616429 682 ntBASIC21.54■■□□□ 1.04
CDKN1AP38936 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDKN1AP38936 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDKN1AP38936 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CDKN1AP38936 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDKN1AP38936 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDKN1AP38936 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDKN1AP38936 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CDKN1AP38936 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDKN1AP38936 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.51■■□□□ 1.03
CDKN1AP38936 AL033527.3-201ENST00000566366 1196 ntBASIC21.51■■□□□ 1.03
CDKN1AP38936 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms