Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 ADH3YMR083W 1128 nt7.64□□□□□ -1.19
TDA11P38854 YOR041CYOR041C 432 nt7.64□□□□□ -1.19
TDA11P38854 PPS1YBR276C 2424 nt7.64□□□□□ -1.19
TDA11P38854 SNA3YJL151C 402 nt7.63□□□□□ -1.19
TDA11P38854 ELP6YMR312W 822 nt7.63□□□□□ -1.19
TDA11P38854 YBL113CYBL113C 2379 nt7.61□□□□□ -1.19
TDA11P38854 WSC3YOL105C 1671 nt7.61□□□□□ -1.19
TDA11P38854 SER2YGR208W 930 nt7.61□□□□□ -1.19
TDA11P38854 YNR001W-AYNR001W-A 219 nt7.61□□□□□ -1.19
TDA11P38854 SPE2YOL052C 1191 nt7.61□□□□□ -1.19
TDA11P38854 YGR068W-AYGR068W-A 96 nt7.6□□□□□ -1.19
TDA11P38854 CYC3YAL039C 810 nt7.6□□□□□ -1.19
TDA11P38854 YMR007WYMR007W 381 nt7.6□□□□□ -1.19
TDA11P38854 CDC23YHR166C 1881 nt7.6□□□□□ -1.19
TDA11P38854 RFS1YBR052C 633 nt7.59□□□□□ -1.19
TDA11P38854 TES1YJR019C 1050 nt7.58□□□□□ -1.2
TDA11P38854 CDA1YLR307W 906 nt7.58□□□□□ -1.2
TDA11P38854 HTS1YPR033C 1641 nt7.57□□□□□ -1.2
TDA11P38854 RCF1YML030W 480 nt7.57□□□□□ -1.2
TDA11P38854 RSC4YKR008W 1878 nt7.57□□□□□ -1.2
TDA11P38854 MTC6YHR151C 1581 nt7.56□□□□□ -1.2
TDA11P38854 SRP102YKL154W 735 nt7.56□□□□□ -1.2
TDA11P38854 GNP1YDR508C 1992 nt7.56□□□□□ -1.2
TDA11P38854 MCM5YLR274W 2328 nt7.56□□□□□ -1.2
TDA11P38854 SDS24YBR214W 1584 nt7.55□□□□□ -1.2
TDA11P38854 YGR137WYGR137W 375 nt7.55□□□□□ -1.2
TDA11P38854 MOB1YIL106W 945 nt7.55□□□□□ -1.2
TDA11P38854 BUD20YLR074C 501 nt7.55□□□□□ -1.2
TDA11P38854 YOR389WYOR389W 1875 nt7.55□□□□□ -1.2
TDA11P38854 DCR2YLR361C 1737 nt7.55□□□□□ -1.2
TDA11P38854 GTS1YGL181W 1191 nt7.54□□□□□ -1.2
TDA11P38854 RCR1YBR005W 642 nt7.54□□□□□ -1.2
TDA11P38854 FLC2YAL053W 2352 nt7.54□□□□□ -1.2
TDA11P38854 RSM7YJR113C 744 nt7.53□□□□□ -1.2
TDA11P38854 RCF2YNR018W 675 nt7.53□□□□□ -1.2
TDA11P38854 SSC1YJR045C 1965 nt7.52□□□□□ -1.21
TDA11P38854 LEO1YOR123C 1395 nt7.52□□□□□ -1.21
TDA11P38854 TRR1YDR353W 960 nt7.52□□□□□ -1.21
TDA11P38854 VBA3YCL069W 1377 nt7.51□□□□□ -1.21
TDA11P38854 YJL043WYJL043W 774 nt7.51□□□□□ -1.21
TDA11P38854 YKR012CYKR012C 378 nt7.51□□□□□ -1.21
TDA11P38854 TCB1YOR086C 3561 nt7.5□□□□□ -1.21
TDA11P38854 ENB1YOL158C 1821 nt7.5□□□□□ -1.21
TDA11P38854 ICL2YPR006C 1728 nt7.5□□□□□ -1.21
TDA11P38854 PPZ2YDR436W 2133 nt7.5□□□□□ -1.21
TDA11P38854 YOR343CYOR343C 327 nt7.5□□□□□ -1.21
TDA11P38854 PAU21YOR394W 495 nt7.5□□□□□ -1.21
TDA11P38854 PAU22YPL282C 495 nt7.5□□□□□ -1.21
TDA11P38854 CAN1YEL063C 1773 nt7.5□□□□□ -1.21
TDA11P38854 SRF1YDL133W 1314 nt7.5□□□□□ -1.21
TDA11P38854 EDC3YEL015W 1656 nt7.49□□□□□ -1.21
TDA11P38854 ERO1YML130C 1692 nt7.48□□□□□ -1.21
TDA11P38854 YGR210CYGR210C 1236 nt7.48□□□□□ -1.21
TDA11P38854 SNP1YIL061C 903 nt7.48□□□□□ -1.21
TDA11P38854 ENO1YGR254W 1314 nt7.48□□□□□ -1.21
TDA11P38854 MAM3YOL060C 2121 nt7.48□□□□□ -1.21
TDA11P38854 HRA1HRA1 564 nt7.47□□□□□ -1.21
TDA11P38854 HNM1YGL077C 1692 nt7.46□□□□□ -1.22
TDA11P38854 RNA170RNA170 169 nt7.45□□□□□ -1.22
TDA11P38854 YDR306CYDR306C 1437 nt7.44□□□□□ -1.22
TDA11P38854 YLR280CYLR280C 351 nt7.44□□□□□ -1.22
TDA11P38854 YPL108WYPL108W 507 nt7.44□□□□□ -1.22
TDA11P38854 SEC23YPR181C 2307 nt7.43□□□□□ -1.22
TDA11P38854 TPI1YDR050C 747 nt7.43□□□□□ -1.22
TDA11P38854 MSS51YLR203C 1311 nt7.43□□□□□ -1.22
TDA11P38854 TGA1tA(UGC)A 73 nt7.42□□□□□ -1.22
TDA11P38854 tA(UGC)EtA(UGC)E 73 nt7.42□□□□□ -1.22
TDA11P38854 tA(UGC)GtA(UGC)G 73 nt7.42□□□□□ -1.22
TDA11P38854 tA(UGC)LtA(UGC)L 73 nt7.42□□□□□ -1.22
TDA11P38854 tA(UGC)OtA(UGC)O 73 nt7.42□□□□□ -1.22
TDA11P38854 YJL160CYJL160C 864 nt7.42□□□□□ -1.22
TDA11P38854 VPS65YLR322W 315 nt7.42□□□□□ -1.22
TDA11P38854 YFR020WYFR020W 699 nt7.41□□□□□ -1.22
TDA11P38854 MEU1YLR017W 1014 nt7.41□□□□□ -1.22
TDA11P38854 SNF7YLR025W 723 nt7.41□□□□□ -1.22
TDA11P38854 YOR012WYOR012W 414 nt7.41□□□□□ -1.22
TDA11P38854 GRH1YDR517W 1119 nt7.4□□□□□ -1.22
TDA11P38854 PAC10YGR078C 600 nt7.4□□□□□ -1.22
TDA11P38854 YAL016C-AYAL016C-A 315 nt7.4□□□□□ -1.22
TDA11P38854 LOT6YLR011W 576 nt7.4□□□□□ -1.22
TDA11P38854 HXT8YJL214W 1710 nt7.4□□□□□ -1.23
TDA11P38854 EFM1YHL039W 1758 nt7.4□□□□□ -1.23
TDA11P38854 RQC1YDR333C 2172 nt7.4□□□□□ -1.23
TDA11P38854 KIN1YDR122W 3195 nt7.39□□□□□ -1.23
TDA11P38854 HHY1YEL059W 309 nt7.39□□□□□ -1.23
TDA11P38854 SNF4YGL115W 969 nt7.38□□□□□ -1.23
TDA11P38854 HAM1YJR069C 594 nt7.38□□□□□ -1.23
TDA11P38854 AOS1YPR180W 1044 nt7.38□□□□□ -1.23
TDA11P38854 CKI1YLR133W 1749 nt7.38□□□□□ -1.23
TDA11P38854 FCY2YER056C 1602 nt7.38□□□□□ -1.23
TDA11P38854 YLR460CYLR460C 1131 nt7.37□□□□□ -1.23
TDA11P38854 ADE2YOR128C 1716 nt7.37□□□□□ -1.23
TDA11P38854 MRP1YDR347W 966 nt7.36□□□□□ -1.23
TDA11P38854 YHL030W-AYHL030W-A 462 nt7.36□□□□□ -1.23
TDA11P38854 ACO1YLR304C 2337 nt7.35□□□□□ -1.23
TDA11P38854 NUP84YDL116W 2181 nt7.35□□□□□ -1.23
TDA11P38854 EDC2YER035W 438 nt7.35□□□□□ -1.23
TDA11P38854 PET10YKR046C 852 nt7.35□□□□□ -1.23
TDA11P38854 FCY1YPR062W 477 nt7.35□□□□□ -1.23
TDA11P38854 YCR041WYCR041W 333 nt7.34□□□□□ -1.23
Retrieved 100 of 7,029 protein–RNA pairs in 67.5 ms