Protein–RNA interactions for Protein: P18077

RPL35A, 60S ribosomal protein L35a, humanhuman

Known RBP Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35AP18077 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPL35AP18077 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPL35AP18077 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RPL35AP18077 AC100797.4-201ENST00000631653 1827 ntBASIC18.81■□□□□ 0.6
RPL35AP18077 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.81■□□□□ 0.6
RPL35AP18077 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPL35AP18077 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
RPL35AP18077 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
RPL35AP18077 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.8■□□□□ 0.6
RPL35AP18077 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.8■□□□□ 0.6
RPL35AP18077 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RPL35AP18077 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC18.8■□□□□ 0.6
RPL35AP18077 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPL35AP18077 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPL35AP18077 ABCB10P3-201ENST00000561950 2166 ntBASIC18.79■□□□□ 0.6
RPL35AP18077 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RPL35AP18077 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RPL35AP18077 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPL35AP18077 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.79■□□□□ 0.6
RPL35AP18077 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPL35AP18077 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC18.79■□□□□ 0.6
RPL35AP18077 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPL35AP18077 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.79■□□□□ 0.6
RPL35AP18077 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC18.78■□□□□ 0.6
RPL35AP18077 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RPL35AP18077 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.78■□□□□ 0.6
RPL35AP18077 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPL35AP18077 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPL35AP18077 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPL35AP18077 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPL35AP18077 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC18.76■□□□□ 0.59
RPL35AP18077 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC18.76■□□□□ 0.59
RPL35AP18077 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPL35AP18077 MIR4449-201ENST00000578365 66 ntBASIC18.76■□□□□ 0.59
RPL35AP18077 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPL35AP18077 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC18.76■□□□□ 0.59
RPL35AP18077 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPL35AP18077 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPL35AP18077 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RPL35AP18077 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC18.75■□□□□ 0.59
RPL35AP18077 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPL35AP18077 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RPL35AP18077 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPL35AP18077 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPL35AP18077 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPL35AP18077 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPL35AP18077 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPL35AP18077 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.74■□□□□ 0.59
RPL35AP18077 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.74■□□□□ 0.59
RPL35AP18077 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.74■□□□□ 0.59
RPL35AP18077 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPL35AP18077 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RPL35AP18077 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPL35AP18077 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPL35AP18077 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPL35AP18077 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RPL35AP18077 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPL35AP18077 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPL35AP18077 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPL35AP18077 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RPL35AP18077 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPL35AP18077 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPL35AP18077 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPL35AP18077 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPL35AP18077 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RPL35AP18077 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.71■□□□□ 0.59
RPL35AP18077 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RPL35AP18077 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RPL35AP18077 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC18.7■□□□□ 0.58
RPL35AP18077 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
RPL35AP18077 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPL35AP18077 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPL35AP18077 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPL35AP18077 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPL35AP18077 AC008813.1-201ENST00000536597 885 ntBASIC18.69■□□□□ 0.58
RPL35AP18077 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RPL35AP18077 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPL35AP18077 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RPL35AP18077 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RPL35AP18077 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC18.68■□□□□ 0.58
RPL35AP18077 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.68■□□□□ 0.58
RPL35AP18077 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
RPL35AP18077 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC18.68■□□□□ 0.58
RPL35AP18077 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPL35AP18077 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPL35AP18077 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPL35AP18077 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPL35AP18077 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPL35AP18077 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
RPL35AP18077 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPL35AP18077 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPL35AP18077 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPL35AP18077 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPL35AP18077 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPL35AP18077 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.67■□□□□ 0.58
RPL35AP18077 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPL35AP18077 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPL35AP18077 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.66■□□□□ 0.58
RPL35AP18077 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.66■□□□□ 0.58
RPL35AP18077 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms