Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
POLR3DP05423 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC30.47■■■□□ 2.47
POLR3DP05423 ABHD17AP3-201ENST00000503096 1137 ntBASIC30.47■■■□□ 2.47
POLR3DP05423 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.47■■■□□ 2.47
POLR3DP05423 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
POLR3DP05423 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
POLR3DP05423 MEST-211ENST00000437945 1455 ntTSL 5 BASIC30.46■■■□□ 2.47
POLR3DP05423 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC30.45■■■□□ 2.47
POLR3DP05423 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
POLR3DP05423 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
POLR3DP05423 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
POLR3DP05423 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.46
POLR3DP05423 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC30.45■■■□□ 2.46
POLR3DP05423 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
POLR3DP05423 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
POLR3DP05423 HSD17B1P1-201ENST00000590052 955 ntBASIC30.44■■■□□ 2.46
POLR3DP05423 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
POLR3DP05423 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.43■■■□□ 2.46
POLR3DP05423 AC008813.1-201ENST00000536597 885 ntBASIC30.43■■■□□ 2.46
POLR3DP05423 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
POLR3DP05423 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
POLR3DP05423 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC30.42■■■□□ 2.46
POLR3DP05423 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
POLR3DP05423 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
POLR3DP05423 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
POLR3DP05423 SHF-206ENST00000560471 2499 ntTSL 5 BASIC30.41■■■□□ 2.46
POLR3DP05423 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC30.41■■■□□ 2.46
POLR3DP05423 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
POLR3DP05423 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
POLR3DP05423 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC30.4■■■□□ 2.46
POLR3DP05423 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.4■■■□□ 2.46
POLR3DP05423 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.46
POLR3DP05423 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
POLR3DP05423 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.39■■■□□ 2.46
POLR3DP05423 AP004833.2-201ENST00000532228 1454 ntBASIC30.39■■■□□ 2.46
POLR3DP05423 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.39■■■□□ 2.46
POLR3DP05423 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.39■■■□□ 2.46
POLR3DP05423 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
POLR3DP05423 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
POLR3DP05423 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.38■■■□□ 2.45
POLR3DP05423 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.38■■■□□ 2.45
POLR3DP05423 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
POLR3DP05423 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
POLR3DP05423 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
POLR3DP05423 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.36■■■□□ 2.45
POLR3DP05423 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.35■■■□□ 2.45
POLR3DP05423 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
POLR3DP05423 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
POLR3DP05423 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.34■■■□□ 2.45
POLR3DP05423 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC30.34■■■□□ 2.45
POLR3DP05423 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
POLR3DP05423 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
POLR3DP05423 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC30.33■■■□□ 2.45
POLR3DP05423 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
POLR3DP05423 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.33■■■□□ 2.45
POLR3DP05423 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
POLR3DP05423 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
POLR3DP05423 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
POLR3DP05423 PEX7-203ENST00000541292 945 ntTSL 5 BASIC30.32■■■□□ 2.44
POLR3DP05423 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
POLR3DP05423 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
POLR3DP05423 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
POLR3DP05423 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
POLR3DP05423 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
POLR3DP05423 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC30.3■■■□□ 2.44
POLR3DP05423 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.3■■■□□ 2.44
POLR3DP05423 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.3■■■□□ 2.44
POLR3DP05423 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.3■■■□□ 2.44
POLR3DP05423 AC100797.4-201ENST00000631653 1827 ntBASIC30.29■■■□□ 2.44
POLR3DP05423 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
POLR3DP05423 AL139393.2-201ENST00000608721 2025 ntBASIC30.29■■■□□ 2.44
POLR3DP05423 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
POLR3DP05423 CHST11-203ENST00000547956 936 ntTSL 2 BASIC30.29■■■□□ 2.44
POLR3DP05423 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
POLR3DP05423 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
POLR3DP05423 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
POLR3DP05423 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
POLR3DP05423 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
POLR3DP05423 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
POLR3DP05423 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
POLR3DP05423 RPS2-210ENST00000530225 765 ntTSL 2 BASIC30.27■■■□□ 2.44
POLR3DP05423 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30.26■■■□□ 2.44
POLR3DP05423 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
POLR3DP05423 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC30.26■■■□□ 2.43
POLR3DP05423 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
POLR3DP05423 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.25■■■□□ 2.43
POLR3DP05423 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.25■■■□□ 2.43
POLR3DP05423 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.25■■■□□ 2.43
POLR3DP05423 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC30.25■■■□□ 2.43
POLR3DP05423 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.24■■■□□ 2.43
POLR3DP05423 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.24■■■□□ 2.43
POLR3DP05423 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.23■■■□□ 2.43
POLR3DP05423 GPX1-201ENST00000419349 1106 ntBASIC30.23■■■□□ 2.43
POLR3DP05423 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
POLR3DP05423 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
POLR3DP05423 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.23■■■□□ 2.43
POLR3DP05423 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.22■■■□□ 2.43
POLR3DP05423 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.21■■■□□ 2.43
POLR3DP05423 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
POLR3DP05423 AC148477.6-201ENST00000623746 465 ntBASIC30.21■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms