Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC30.55■■■□□ 2.48
APPP05067 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
APPP05067 AC110285.7-201ENST00000624417 1536 ntBASIC30.54■■■□□ 2.48
APPP05067 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
APPP05067 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC30.54■■■□□ 2.48
APPP05067 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
APPP05067 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
APPP05067 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.51■■■□□ 2.47
APPP05067 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC30.5■■■□□ 2.47
APPP05067 MIR639-201ENST00000384974 98 ntBASIC30.5■■■□□ 2.47
APPP05067 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
APPP05067 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
APPP05067 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.49■■■□□ 2.47
APPP05067 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC30.48■■■□□ 2.47
APPP05067 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC30.48■■■□□ 2.47
APPP05067 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
APPP05067 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.47■■■□□ 2.47
APPP05067 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
APPP05067 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
APPP05067 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
APPP05067 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.46■■■□□ 2.47
APPP05067 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC30.46■■■□□ 2.47
APPP05067 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC30.46■■■□□ 2.47
APPP05067 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.47
APPP05067 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
APPP05067 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC30.45■■■□□ 2.46
APPP05067 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
APPP05067 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
APPP05067 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
APPP05067 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
APPP05067 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
APPP05067 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
APPP05067 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC30.44■■■□□ 2.46
APPP05067 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
APPP05067 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.43■■■□□ 2.46
APPP05067 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.43■■■□□ 2.46
APPP05067 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
APPP05067 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC30.42■■■□□ 2.46
APPP05067 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
APPP05067 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
APPP05067 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC30.4■■■□□ 2.46
APPP05067 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
APPP05067 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
APPP05067 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
APPP05067 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
APPP05067 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
APPP05067 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
APPP05067 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC30.38■■■□□ 2.45
APPP05067 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
APPP05067 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
APPP05067 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
APPP05067 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC30.37■■■□□ 2.45
APPP05067 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC30.37■■■□□ 2.45
APPP05067 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
APPP05067 PEX7-203ENST00000541292 945 ntTSL 5 BASIC30.36■■■□□ 2.45
APPP05067 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
APPP05067 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
APPP05067 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
APPP05067 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
APPP05067 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
APPP05067 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
APPP05067 MIR4449-201ENST00000578365 66 ntBASIC30.34■■■□□ 2.45
APPP05067 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
APPP05067 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
APPP05067 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
APPP05067 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
APPP05067 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
APPP05067 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
APPP05067 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC30.32■■■□□ 2.45
APPP05067 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.32■■■□□ 2.44
APPP05067 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
APPP05067 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
APPP05067 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
APPP05067 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC30.31■■■□□ 2.44
APPP05067 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
APPP05067 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
APPP05067 AC008813.1-201ENST00000536597 885 ntBASIC30.3■■■□□ 2.44
APPP05067 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30.29■■■□□ 2.44
APPP05067 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
APPP05067 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
APPP05067 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.28■■■□□ 2.44
APPP05067 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
APPP05067 SHF-206ENST00000560471 2499 ntTSL 5 BASIC30.28■■■□□ 2.44
APPP05067 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
APPP05067 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
APPP05067 DRD5P2-201ENST00000421395 2012 ntBASIC30.26■■■□□ 2.43
APPP05067 RPS2-210ENST00000530225 765 ntTSL 2 BASIC30.26■■■□□ 2.43
APPP05067 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.26■■■□□ 2.43
APPP05067 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
APPP05067 AP002414.2-202ENST00000590929 1450 ntBASIC30.25■■■□□ 2.43
APPP05067 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
APPP05067 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC30.25■■■□□ 2.43
APPP05067 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC30.25■■■□□ 2.43
APPP05067 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
APPP05067 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.24■■■□□ 2.43
APPP05067 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC30.24■■■□□ 2.43
APPP05067 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
APPP05067 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
APPP05067 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC30.23■■■□□ 2.43
APPP05067 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms