Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV12-3P01733 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TRBV12-3P01733 DUX4L13-201ENST00000554103 1267 ntBASIC19.68■□□□□ 0.74
TRBV12-3P01733 DUX4L15-201ENST00000611059 1267 ntBASIC19.68■□□□□ 0.74
TRBV12-3P01733 DUX4L23-201ENST00000615195 1269 ntBASIC19.68■□□□□ 0.74
TRBV12-3P01733 DUX4L24-201ENST00000617576 1269 ntBASIC19.68■□□□□ 0.74
TRBV12-3P01733 DUX4L22-201ENST00000618238 1269 ntBASIC19.68■□□□□ 0.74
TRBV12-3P01733 DUX4L20-201ENST00000619712 1269 ntBASIC19.68■□□□□ 0.74
TRBV12-3P01733 DUX4L21-201ENST00000622058 1269 ntBASIC19.68■□□□□ 0.74
TRBV12-3P01733 DUX4L10-201ENST00000622460 1267 ntBASIC19.68■□□□□ 0.74
TRBV12-3P01733 DUX4L25-201ENST00000624915 1269 ntBASIC19.68■□□□□ 0.74
TRBV12-3P01733 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TRBV12-3P01733 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV12-3P01733 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV12-3P01733 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV12-3P01733 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV12-3P01733 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV12-3P01733 AC110285.7-201ENST00000624417 1536 ntBASIC19.66■□□□□ 0.74
TRBV12-3P01733 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.66■□□□□ 0.74
TRBV12-3P01733 CR559946.2-201ENST00000623684 991 ntBASIC19.66■□□□□ 0.74
TRBV12-3P01733 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV12-3P01733 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV12-3P01733 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV12-3P01733 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV12-3P01733 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.65■□□□□ 0.74
TRBV12-3P01733 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV12-3P01733 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV12-3P01733 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.65■□□□□ 0.74
TRBV12-3P01733 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV12-3P01733 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV12-3P01733 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TRBV12-3P01733 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TRBV12-3P01733 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV12-3P01733 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.63■□□□□ 0.73
TRBV12-3P01733 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV12-3P01733 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV12-3P01733 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.62■□□□□ 0.73
TRBV12-3P01733 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.62■□□□□ 0.73
TRBV12-3P01733 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.62■□□□□ 0.73
TRBV12-3P01733 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.62■□□□□ 0.73
TRBV12-3P01733 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.62■□□□□ 0.73
TRBV12-3P01733 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV12-3P01733 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV12-3P01733 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV12-3P01733 MIR3648-2-201ENST00000581792 180 ntBASIC19.61■□□□□ 0.73
TRBV12-3P01733 MIR3648-1-201ENST00000615959 180 ntBASIC19.61■□□□□ 0.73
TRBV12-3P01733 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.6■□□□□ 0.73
TRBV12-3P01733 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.6■□□□□ 0.73
TRBV12-3P01733 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.6■□□□□ 0.73
TRBV12-3P01733 AC016575.1-201ENST00000607026 382 ntBASIC19.6■□□□□ 0.73
TRBV12-3P01733 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV12-3P01733 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV12-3P01733 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV12-3P01733 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV12-3P01733 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV12-3P01733 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
TRBV12-3P01733 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV12-3P01733 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV12-3P01733 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TRBV12-3P01733 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TRBV12-3P01733 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV12-3P01733 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV12-3P01733 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
TRBV12-3P01733 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.58■□□□□ 0.73
TRBV12-3P01733 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRBV12-3P01733 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRBV12-3P01733 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRBV12-3P01733 AP002414.2-202ENST00000590929 1450 ntBASIC19.58■□□□□ 0.72
TRBV12-3P01733 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
TRBV12-3P01733 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV12-3P01733 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV12-3P01733 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.57■□□□□ 0.72
TRBV12-3P01733 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV12-3P01733 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.57■□□□□ 0.72
TRBV12-3P01733 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV12-3P01733 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV12-3P01733 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV12-3P01733 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV12-3P01733 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV12-3P01733 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.56■□□□□ 0.72
TRBV12-3P01733 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.56■□□□□ 0.72
TRBV12-3P01733 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.56■□□□□ 0.72
TRBV12-3P01733 AC142086.6-201ENST00000621154 1765 ntBASIC19.55■□□□□ 0.72
TRBV12-3P01733 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.55■□□□□ 0.72
TRBV12-3P01733 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.55■□□□□ 0.72
TRBV12-3P01733 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.55■□□□□ 0.72
TRBV12-3P01733 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.55■□□□□ 0.72
TRBV12-3P01733 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV12-3P01733 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.54■□□□□ 0.72
TRBV12-3P01733 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV12-3P01733 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV12-3P01733 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV12-3P01733 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV12-3P01733 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV12-3P01733 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV12-3P01733 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.52■□□□□ 0.72
TRBV12-3P01733 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.52■□□□□ 0.71
TRBV12-3P01733 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TRBV12-3P01733 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TRBV12-3P01733 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms