Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIX6O95475 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.23■□□□□ 0.99
SIX6O95475 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
SIX6O95475 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
SIX6O95475 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.22■□□□□ 0.99
SIX6O95475 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
SIX6O95475 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SIX6O95475 AC010864.1-201ENST00000609407 1511 ntBASIC21.2■□□□□ 0.98
SIX6O95475 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SIX6O95475 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SIX6O95475 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SIX6O95475 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SIX6O95475 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.19■□□□□ 0.98
SIX6O95475 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SIX6O95475 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SIX6O95475 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SIX6O95475 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.19■□□□□ 0.98
SIX6O95475 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SIX6O95475 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SIX6O95475 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SIX6O95475 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SIX6O95475 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SIX6O95475 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
SIX6O95475 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SIX6O95475 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SIX6O95475 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.18■□□□□ 0.98
SIX6O95475 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIX6O95475 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIX6O95475 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.17■□□□□ 0.98
SIX6O95475 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.17■□□□□ 0.98
SIX6O95475 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIX6O95475 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIX6O95475 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIX6O95475 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIX6O95475 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SIX6O95475 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIX6O95475 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIX6O95475 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
SIX6O95475 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SIX6O95475 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SIX6O95475 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SIX6O95475 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SIX6O95475 AC145676.1-201ENST00000514988 2004 ntBASIC21.14■□□□□ 0.97
SIX6O95475 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SIX6O95475 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SIX6O95475 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC21.13■□□□□ 0.97
SIX6O95475 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SIX6O95475 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SIX6O95475 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SIX6O95475 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SIX6O95475 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC21.12■□□□□ 0.97
SIX6O95475 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
SIX6O95475 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SIX6O95475 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SIX6O95475 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SIX6O95475 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SIX6O95475 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SIX6O95475 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.1■□□□□ 0.97
SIX6O95475 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SIX6O95475 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.1■□□□□ 0.97
SIX6O95475 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.09■□□□□ 0.97
SIX6O95475 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
SIX6O95475 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SIX6O95475 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SIX6O95475 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.08■□□□□ 0.97
SIX6O95475 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.08■□□□□ 0.96
SIX6O95475 AP004833.2-201ENST00000532228 1454 ntBASIC21.07■□□□□ 0.96
SIX6O95475 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.07■□□□□ 0.96
SIX6O95475 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.07■□□□□ 0.96
SIX6O95475 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.06■□□□□ 0.96
SIX6O95475 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.06■□□□□ 0.96
SIX6O95475 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SIX6O95475 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SIX6O95475 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SIX6O95475 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SIX6O95475 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.06■□□□□ 0.96
SIX6O95475 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SIX6O95475 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
SIX6O95475 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SIX6O95475 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SIX6O95475 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SIX6O95475 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SIX6O95475 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.05■□□□□ 0.96
SIX6O95475 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SIX6O95475 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SIX6O95475 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SIX6O95475 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SIX6O95475 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.03■□□□□ 0.96
SIX6O95475 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SIX6O95475 EBPL-203ENST00000378270 579 ntTSL 2 BASIC21.03■□□□□ 0.96
SIX6O95475 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
SIX6O95475 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SIX6O95475 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SIX6O95475 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SIX6O95475 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SIX6O95475 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SIX6O95475 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SIX6O95475 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
SIX6O95475 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SIX6O95475 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 221.7 ms