Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHGA12O60330 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHGA12O60330 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.2■■□□□ 1.62
PCDHGA12O60330 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHGA12O60330 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHGA12O60330 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHGA12O60330 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHGA12O60330 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHGA12O60330 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHGA12O60330 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHGA12O60330 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHGA12O60330 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
PCDHGA12O60330 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHGA12O60330 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.17■■□□□ 1.62
PCDHGA12O60330 AC148477.6-201ENST00000623746 465 ntBASIC25.17■■□□□ 1.62
PCDHGA12O60330 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
PCDHGA12O60330 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHGA12O60330 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.16■■□□□ 1.62
PCDHGA12O60330 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
PCDHGA12O60330 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHGA12O60330 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHGA12O60330 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHGA12O60330 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHGA12O60330 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHGA12O60330 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHGA12O60330 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHGA12O60330 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHGA12O60330 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHGA12O60330 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.14■■□□□ 1.61
PCDHGA12O60330 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PCDHGA12O60330 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHGA12O60330 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHGA12O60330 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.13■■□□□ 1.61
PCDHGA12O60330 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHGA12O60330 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.12■■□□□ 1.61
PCDHGA12O60330 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHGA12O60330 AC110285.7-201ENST00000624417 1536 ntBASIC25.12■■□□□ 1.61
PCDHGA12O60330 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHGA12O60330 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
PCDHGA12O60330 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.11■■□□□ 1.61
PCDHGA12O60330 AC060814.1-201ENST00000554326 538 ntBASIC25.11■■□□□ 1.61
PCDHGA12O60330 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHGA12O60330 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHGA12O60330 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHGA12O60330 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHGA12O60330 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHGA12O60330 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHGA12O60330 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.08■■□□□ 1.61
PCDHGA12O60330 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.08■■□□□ 1.6
PCDHGA12O60330 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
PCDHGA12O60330 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
PCDHGA12O60330 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.06■■□□□ 1.6
PCDHGA12O60330 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
PCDHGA12O60330 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC25.06■■□□□ 1.6
PCDHGA12O60330 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHGA12O60330 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.06■■□□□ 1.6
PCDHGA12O60330 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
PCDHGA12O60330 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHGA12O60330 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHGA12O60330 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.05■■□□□ 1.6
PCDHGA12O60330 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHGA12O60330 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHGA12O60330 U85056.1-201ENST00000616429 682 ntBASIC25.04■■□□□ 1.6
PCDHGA12O60330 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHGA12O60330 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.04■■□□□ 1.6
PCDHGA12O60330 AC018358.1-201ENST00000631079 1402 ntBASIC25.03■■□□□ 1.6
PCDHGA12O60330 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHGA12O60330 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHGA12O60330 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
PCDHGA12O60330 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
PCDHGA12O60330 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.02■■□□□ 1.6
PCDHGA12O60330 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHGA12O60330 AL033527.3-201ENST00000566366 1196 ntBASIC25.01■■□□□ 1.59
PCDHGA12O60330 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
PCDHGA12O60330 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHGA12O60330 MIR219A2-201ENST00000608502 1504 ntBASIC25.01■■□□□ 1.59
PCDHGA12O60330 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHGA12O60330 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25■■□□□ 1.59
PCDHGA12O60330 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHGA12O60330 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHGA12O60330 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHGA12O60330 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25■■□□□ 1.59
PCDHGA12O60330 AC139426.1-201ENST00000568218 2529 ntBASIC25■■□□□ 1.59
PCDHGA12O60330 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHGA12O60330 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHGA12O60330 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.99■■□□□ 1.59
PCDHGA12O60330 AC092296.2-201ENST00000589470 999 ntBASIC24.99■■□□□ 1.59
PCDHGA12O60330 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHGA12O60330 AL135925.1-201ENST00000605920 1701 ntBASIC24.99■■□□□ 1.59
PCDHGA12O60330 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.98■■□□□ 1.59
PCDHGA12O60330 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.98■■□□□ 1.59
PCDHGA12O60330 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHGA12O60330 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHGA12O60330 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHGA12O60330 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHGA12O60330 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.97■■□□□ 1.59
PCDHGA12O60330 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHGA12O60330 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHGA12O60330 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
PCDHGA12O60330 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms