Protein–RNA interactions for Protein: O43676

NDUFB3, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3O43676 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.2■□□□□ 0.99
NDUFB3O43676 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.2■□□□□ 0.98
NDUFB3O43676 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.2■□□□□ 0.98
NDUFB3O43676 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NDUFB3O43676 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NDUFB3O43676 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
NDUFB3O43676 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.19■□□□□ 0.98
NDUFB3O43676 AC110285.7-201ENST00000624417 1536 ntBASIC21.19■□□□□ 0.98
NDUFB3O43676 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
NDUFB3O43676 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
NDUFB3O43676 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.18■□□□□ 0.98
NDUFB3O43676 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NDUFB3O43676 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NDUFB3O43676 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NDUFB3O43676 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.17■□□□□ 0.98
NDUFB3O43676 MIR3648-2-201ENST00000581792 180 ntBASIC21.17■□□□□ 0.98
NDUFB3O43676 MIR3648-1-201ENST00000615959 180 ntBASIC21.17■□□□□ 0.98
NDUFB3O43676 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NDUFB3O43676 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NDUFB3O43676 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NDUFB3O43676 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NDUFB3O43676 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.17■□□□□ 0.98
NDUFB3O43676 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.16■□□□□ 0.98
NDUFB3O43676 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NDUFB3O43676 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NDUFB3O43676 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.16■□□□□ 0.98
NDUFB3O43676 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.16■□□□□ 0.98
NDUFB3O43676 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NDUFB3O43676 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NDUFB3O43676 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NDUFB3O43676 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.15■□□□□ 0.98
NDUFB3O43676 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NDUFB3O43676 CR559946.2-201ENST00000623684 991 ntBASIC21.15■□□□□ 0.98
NDUFB3O43676 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NDUFB3O43676 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.15■□□□□ 0.98
NDUFB3O43676 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NDUFB3O43676 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
NDUFB3O43676 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NDUFB3O43676 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
NDUFB3O43676 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.13■□□□□ 0.97
NDUFB3O43676 AC016575.1-201ENST00000607026 382 ntBASIC21.13■□□□□ 0.97
NDUFB3O43676 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NDUFB3O43676 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
NDUFB3O43676 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NDUFB3O43676 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NDUFB3O43676 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NDUFB3O43676 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
NDUFB3O43676 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
NDUFB3O43676 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.1■□□□□ 0.97
NDUFB3O43676 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NDUFB3O43676 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NDUFB3O43676 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
NDUFB3O43676 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
NDUFB3O43676 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NDUFB3O43676 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NDUFB3O43676 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
NDUFB3O43676 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
NDUFB3O43676 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NDUFB3O43676 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NDUFB3O43676 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NDUFB3O43676 AP002414.2-202ENST00000590929 1450 ntBASIC21.08■□□□□ 0.97
NDUFB3O43676 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NDUFB3O43676 HLA-V-202ENST00000446817 847 ntBASIC21.08■□□□□ 0.97
NDUFB3O43676 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.08■□□□□ 0.96
NDUFB3O43676 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NDUFB3O43676 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NDUFB3O43676 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
NDUFB3O43676 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.07■□□□□ 0.96
NDUFB3O43676 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NDUFB3O43676 DRD5P2-201ENST00000421395 2012 ntBASIC21.06■□□□□ 0.96
NDUFB3O43676 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NDUFB3O43676 AC008813.1-201ENST00000536597 885 ntBASIC21.06■□□□□ 0.96
NDUFB3O43676 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NDUFB3O43676 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.06■□□□□ 0.96
NDUFB3O43676 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NDUFB3O43676 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NDUFB3O43676 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NDUFB3O43676 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NDUFB3O43676 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NDUFB3O43676 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.05■□□□□ 0.96
NDUFB3O43676 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.05■□□□□ 0.96
NDUFB3O43676 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NDUFB3O43676 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NDUFB3O43676 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NDUFB3O43676 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NDUFB3O43676 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NDUFB3O43676 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NDUFB3O43676 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NDUFB3O43676 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NDUFB3O43676 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NDUFB3O43676 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.03■□□□□ 0.96
NDUFB3O43676 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NDUFB3O43676 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NDUFB3O43676 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NDUFB3O43676 MIR639-201ENST00000384974 98 ntBASIC21.02■□□□□ 0.96
NDUFB3O43676 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.02■□□□□ 0.96
NDUFB3O43676 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NDUFB3O43676 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
NDUFB3O43676 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NDUFB3O43676 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms