Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
CDX4O14627 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CDX4O14627 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CDX4O14627 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.09■■□□□ 1.61
CDX4O14627 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CDX4O14627 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
CDX4O14627 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CDX4O14627 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CDX4O14627 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CDX4O14627 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CDX4O14627 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.07■■□□□ 1.6
CDX4O14627 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CDX4O14627 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.07■■□□□ 1.6
CDX4O14627 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDX4O14627 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDX4O14627 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.06■■□□□ 1.6
CDX4O14627 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.06■■□□□ 1.6
CDX4O14627 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
CDX4O14627 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CDX4O14627 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.04■■□□□ 1.6
CDX4O14627 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CDX4O14627 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.04■■□□□ 1.6
CDX4O14627 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.04■■□□□ 1.6
CDX4O14627 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDX4O14627 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
CDX4O14627 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CDX4O14627 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.03■■□□□ 1.6
CDX4O14627 AC129492.7-201ENST00000622992 756 ntBASIC25.03■■□□□ 1.6
CDX4O14627 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CDX4O14627 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
CDX4O14627 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.02■■□□□ 1.6
CDX4O14627 AL035685.1-201ENST00000636663 812 ntBASIC25.02■■□□□ 1.6
CDX4O14627 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
CDX4O14627 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
CDX4O14627 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC25.02■■□□□ 1.6
CDX4O14627 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
CDX4O14627 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDX4O14627 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CDX4O14627 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25■■□□□ 1.59
CDX4O14627 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CDX4O14627 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC24.99■■□□□ 1.59
CDX4O14627 DUX4L18-201ENST00000553347 1267 ntBASIC24.99■■□□□ 1.59
CDX4O14627 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.99■■□□□ 1.59
CDX4O14627 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CDX4O14627 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.99■■□□□ 1.59
CDX4O14627 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
CDX4O14627 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CDX4O14627 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
CDX4O14627 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CDX4O14627 AC126177.7-201ENST00000547904 679 ntBASIC24.97■■□□□ 1.59
CDX4O14627 AL451085.2-201ENST00000605085 799 ntBASIC24.97■■□□□ 1.59
CDX4O14627 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDX4O14627 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDX4O14627 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDX4O14627 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.96■■□□□ 1.59
CDX4O14627 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24.96■■□□□ 1.59
CDX4O14627 AL157400.5-201ENST00000507624 621 ntBASIC24.96■■□□□ 1.59
CDX4O14627 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDX4O14627 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDX4O14627 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CDX4O14627 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CDX4O14627 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.58
CDX4O14627 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
CDX4O14627 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CDX4O14627 AL592293.1-201ENST00000502889 1188 ntBASIC24.94■■□□□ 1.58
CDX4O14627 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CDX4O14627 AL592295.1-201ENST00000400984 884 ntBASIC24.93■■□□□ 1.58
CDX4O14627 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CDX4O14627 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC24.93■■□□□ 1.58
CDX4O14627 AC007029.1-201ENST00000604183 313 ntBASIC24.93■■□□□ 1.58
CDX4O14627 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.93■■□□□ 1.58
CDX4O14627 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CDX4O14627 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.92■■□□□ 1.58
CDX4O14627 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CDX4O14627 AC133552.2-201ENST00000619106 1032 ntBASIC24.91■■□□□ 1.58
CDX4O14627 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CDX4O14627 AC009831.1-201ENST00000580420 1582 ntBASIC24.91■■□□□ 1.58
CDX4O14627 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CDX4O14627 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.9■■□□□ 1.58
CDX4O14627 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CDX4O14627 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CDX4O14627 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CDX4O14627 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CDX4O14627 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.89■■□□□ 1.58
CDX4O14627 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.89■■□□□ 1.58
CDX4O14627 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.89■■□□□ 1.58
CDX4O14627 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CDX4O14627 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDX4O14627 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDX4O14627 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC24.88■■□□□ 1.57
CDX4O14627 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CDX4O14627 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CDX4O14627 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDX4O14627 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.87■■□□□ 1.57
CDX4O14627 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
CDX4O14627 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CDX4O14627 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.86■■□□□ 1.57
CDX4O14627 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CDX4O14627 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
CDX4O14627 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms