Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NDUFA4O00483 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NDUFA4O00483 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
NDUFA4O00483 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
NDUFA4O00483 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NDUFA4O00483 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NDUFA4O00483 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.52■□□□□ 0.72
NDUFA4O00483 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.51■□□□□ 0.71
NDUFA4O00483 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NDUFA4O00483 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NDUFA4O00483 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.51■□□□□ 0.71
NDUFA4O00483 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NDUFA4O00483 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
NDUFA4O00483 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.5■□□□□ 0.71
NDUFA4O00483 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.5■□□□□ 0.71
NDUFA4O00483 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NDUFA4O00483 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NDUFA4O00483 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NDUFA4O00483 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.49■□□□□ 0.71
NDUFA4O00483 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NDUFA4O00483 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NDUFA4O00483 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NDUFA4O00483 LINC01971-201ENST00000617888 1048 ntBASIC19.48■□□□□ 0.71
NDUFA4O00483 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
NDUFA4O00483 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NDUFA4O00483 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NDUFA4O00483 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NDUFA4O00483 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NDUFA4O00483 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NDUFA4O00483 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NDUFA4O00483 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.46■□□□□ 0.71
NDUFA4O00483 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.46■□□□□ 0.71
NDUFA4O00483 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
NDUFA4O00483 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NDUFA4O00483 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NDUFA4O00483 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.45■□□□□ 0.7
NDUFA4O00483 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.45■□□□□ 0.7
NDUFA4O00483 BX255925.1-201ENST00000566954 1854 ntBASIC19.45■□□□□ 0.7
NDUFA4O00483 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NDUFA4O00483 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.44■□□□□ 0.7
NDUFA4O00483 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.44■□□□□ 0.7
NDUFA4O00483 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NDUFA4O00483 AC110285.7-201ENST00000624417 1536 ntBASIC19.44■□□□□ 0.7
NDUFA4O00483 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NDUFA4O00483 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.44■□□□□ 0.7
NDUFA4O00483 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDUFA4O00483 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.43■□□□□ 0.7
NDUFA4O00483 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.43■□□□□ 0.7
NDUFA4O00483 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDUFA4O00483 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDUFA4O00483 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDUFA4O00483 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
NDUFA4O00483 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.42■□□□□ 0.7
NDUFA4O00483 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDUFA4O00483 ZNRF2P2-203ENST00000454624 420 ntBASIC19.42■□□□□ 0.7
NDUFA4O00483 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDUFA4O00483 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
NDUFA4O00483 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDUFA4O00483 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDUFA4O00483 LINC01003-201ENST00000564834 1764 ntBASIC19.42■□□□□ 0.7
NDUFA4O00483 AC018358.1-201ENST00000631079 1402 ntBASIC19.42■□□□□ 0.7
NDUFA4O00483 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.41■□□□□ 0.7
NDUFA4O00483 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFA4O00483 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
NDUFA4O00483 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
NDUFA4O00483 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.4■□□□□ 0.7
NDUFA4O00483 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFA4O00483 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
NDUFA4O00483 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFA4O00483 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
NDUFA4O00483 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NDUFA4O00483 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NDUFA4O00483 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
NDUFA4O00483 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NDUFA4O00483 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
NDUFA4O00483 ABHD17AP4-201ENST00000411545 909 ntBASIC19.38■□□□□ 0.69
NDUFA4O00483 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.38■□□□□ 0.69
NDUFA4O00483 DUX4L13-201ENST00000554103 1267 ntBASIC19.38■□□□□ 0.69
NDUFA4O00483 DUX4L15-201ENST00000611059 1267 ntBASIC19.38■□□□□ 0.69
NDUFA4O00483 DUX4L23-201ENST00000615195 1269 ntBASIC19.38■□□□□ 0.69
NDUFA4O00483 DUX4L24-201ENST00000617576 1269 ntBASIC19.38■□□□□ 0.69
NDUFA4O00483 DUX4L22-201ENST00000618238 1269 ntBASIC19.38■□□□□ 0.69
NDUFA4O00483 DUX4L20-201ENST00000619712 1269 ntBASIC19.38■□□□□ 0.69
NDUFA4O00483 DUX4L21-201ENST00000622058 1269 ntBASIC19.38■□□□□ 0.69
NDUFA4O00483 DUX4L10-201ENST00000622460 1267 ntBASIC19.38■□□□□ 0.69
NDUFA4O00483 DUX4L25-201ENST00000624915 1269 ntBASIC19.38■□□□□ 0.69
NDUFA4O00483 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.37■□□□□ 0.69
NDUFA4O00483 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NDUFA4O00483 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NDUFA4O00483 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.37■□□□□ 0.69
NDUFA4O00483 DUX4L11-201ENST00000611504 1267 ntBASIC19.37■□□□□ 0.69
NDUFA4O00483 DUX4L12-201ENST00000614593 1267 ntBASIC19.37■□□□□ 0.69
NDUFA4O00483 DUX4L14-201ENST00000621227 1267 ntBASIC19.37■□□□□ 0.69
NDUFA4O00483 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.36■□□□□ 0.69
NDUFA4O00483 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NDUFA4O00483 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NDUFA4O00483 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.35■□□□□ 0.69
NDUFA4O00483 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NDUFA4O00483 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NDUFA4O00483 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms