Protein–RNA interactions for Protein: A0A0B4J264

TRAV38-1, T-cell receptor alpha variable 38-1 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1A0A0B4J264 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRAV38-1A0A0B4J264 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAV38-1A0A0B4J264 AC100797.4-201ENST00000631653 1827 ntBASIC21.38■■□□□ 1.01
TRAV38-1A0A0B4J264 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.38■■□□□ 1.01
TRAV38-1A0A0B4J264 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.37■■□□□ 1.01
TRAV38-1A0A0B4J264 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.37■■□□□ 1.01
TRAV38-1A0A0B4J264 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
TRAV38-1A0A0B4J264 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRAV38-1A0A0B4J264 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV38-1A0A0B4J264 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV38-1A0A0B4J264 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV38-1A0A0B4J264 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV38-1A0A0B4J264 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRAV38-1A0A0B4J264 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
TRAV38-1A0A0B4J264 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRAV38-1A0A0B4J264 MIR3648-2-201ENST00000581792 180 ntBASIC21.35■■□□□ 1.01
TRAV38-1A0A0B4J264 MIR3648-1-201ENST00000615959 180 ntBASIC21.35■■□□□ 1.01
TRAV38-1A0A0B4J264 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.35■■□□□ 1.01
TRAV38-1A0A0B4J264 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRAV38-1A0A0B4J264 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.35■■□□□ 1.01
TRAV38-1A0A0B4J264 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRAV38-1A0A0B4J264 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRAV38-1A0A0B4J264 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.35■■□□□ 1.01
TRAV38-1A0A0B4J264 AC110285.7-201ENST00000624417 1536 ntBASIC21.34■■□□□ 1.01
TRAV38-1A0A0B4J264 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.34■■□□□ 1.01
TRAV38-1A0A0B4J264 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRAV38-1A0A0B4J264 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.33■■□□□ 1.01
TRAV38-1A0A0B4J264 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.33■■□□□ 1.01
TRAV38-1A0A0B4J264 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TRAV38-1A0A0B4J264 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRAV38-1A0A0B4J264 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
TRAV38-1A0A0B4J264 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRAV38-1A0A0B4J264 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.32■■□□□ 1
TRAV38-1A0A0B4J264 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.32■■□□□ 1
TRAV38-1A0A0B4J264 CR559946.2-201ENST00000623684 991 ntBASIC21.32■■□□□ 1
TRAV38-1A0A0B4J264 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
TRAV38-1A0A0B4J264 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAV38-1A0A0B4J264 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAV38-1A0A0B4J264 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.31■■□□□ 1
TRAV38-1A0A0B4J264 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
TRAV38-1A0A0B4J264 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
TRAV38-1A0A0B4J264 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.3■■□□□ 1
TRAV38-1A0A0B4J264 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRAV38-1A0A0B4J264 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRAV38-1A0A0B4J264 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRAV38-1A0A0B4J264 AC016575.1-201ENST00000607026 382 ntBASIC21.29■■□□□ 1
TRAV38-1A0A0B4J264 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRAV38-1A0A0B4J264 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRAV38-1A0A0B4J264 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.28■■□□□ 1
TRAV38-1A0A0B4J264 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.28■■□□□ 1
TRAV38-1A0A0B4J264 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
TRAV38-1A0A0B4J264 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
TRAV38-1A0A0B4J264 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
TRAV38-1A0A0B4J264 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRAV38-1A0A0B4J264 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRAV38-1A0A0B4J264 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRAV38-1A0A0B4J264 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAV38-1A0A0B4J264 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TRAV38-1A0A0B4J264 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRAV38-1A0A0B4J264 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRAV38-1A0A0B4J264 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.26■□□□□ 0.99
TRAV38-1A0A0B4J264 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAV38-1A0A0B4J264 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAV38-1A0A0B4J264 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.25■□□□□ 0.99
TRAV38-1A0A0B4J264 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAV38-1A0A0B4J264 AC008813.1-201ENST00000536597 885 ntBASIC21.25■□□□□ 0.99
TRAV38-1A0A0B4J264 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TRAV38-1A0A0B4J264 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAV38-1A0A0B4J264 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAV38-1A0A0B4J264 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAV38-1A0A0B4J264 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.24■□□□□ 0.99
TRAV38-1A0A0B4J264 AP002414.2-202ENST00000590929 1450 ntBASIC21.24■□□□□ 0.99
TRAV38-1A0A0B4J264 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAV38-1A0A0B4J264 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRAV38-1A0A0B4J264 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.23■□□□□ 0.99
TRAV38-1A0A0B4J264 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAV38-1A0A0B4J264 HLA-V-202ENST00000446817 847 ntBASIC21.23■□□□□ 0.99
TRAV38-1A0A0B4J264 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRAV38-1A0A0B4J264 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.23■□□□□ 0.99
TRAV38-1A0A0B4J264 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TRAV38-1A0A0B4J264 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAV38-1A0A0B4J264 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRAV38-1A0A0B4J264 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.22■□□□□ 0.99
TRAV38-1A0A0B4J264 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRAV38-1A0A0B4J264 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAV38-1A0A0B4J264 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TRAV38-1A0A0B4J264 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAV38-1A0A0B4J264 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV38-1A0A0B4J264 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
TRAV38-1A0A0B4J264 MIR639-201ENST00000384974 98 ntBASIC21.21■□□□□ 0.99
TRAV38-1A0A0B4J264 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV38-1A0A0B4J264 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.21■□□□□ 0.99
TRAV38-1A0A0B4J264 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV38-1A0A0B4J264 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV38-1A0A0B4J264 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAV38-1A0A0B4J264 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAV38-1A0A0B4J264 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.2■□□□□ 0.98
TRAV38-1A0A0B4J264 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRAV38-1A0A0B4J264 DRD5P2-201ENST00000421395 2012 ntBASIC21.19■□□□□ 0.98
TRAV38-1A0A0B4J264 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms