Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AC015967.1-201ENST00000619893 476 ntBASIC4.83□□□□□ -1.64
SSRP1Q08945 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.83□□□□□ -1.64
SSRP1Q08945 AC010338.1-201ENST00000621823 717 ntBASIC4.83□□□□□ -1.64
SSRP1Q08945 AC025034.2-201ENST00000623264 286 ntBASIC4.83□□□□□ -1.64
SSRP1Q08945 AC008785.1-201ENST00000624475 456 ntBASIC4.83□□□□□ -1.64
SSRP1Q08945 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.83□□□□□ -1.64
SSRP1Q08945 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SSRP1Q08945 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SSRP1Q08945 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSRP1Q08945 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SSRP1Q08945 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.83□□□□□ -1.64
SSRP1Q08945 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.83□□□□□ -1.64
SSRP1Q08945 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSRP1Q08945 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SSRP1Q08945 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSRP1Q08945 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSRP1Q08945 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
SSRP1Q08945 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SSRP1Q08945 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSRP1Q08945 AL137003.2-201ENST00000606924 2538 ntBASIC4.82□□□□□ -1.64
SSRP1Q08945 LARP1BP1-201ENST00000506036 1359 ntBASIC4.82□□□□□ -1.64
SSRP1Q08945 ASNSP3-201ENST00000451989 1306 ntBASIC4.82□□□□□ -1.64
SSRP1Q08945 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SSRP1Q08945 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSRP1Q08945 AL139276.1-201ENST00000311910 1001 ntBASIC4.82□□□□□ -1.64
SSRP1Q08945 RNU6-1029P-201ENST00000384109 107 ntBASIC4.82□□□□□ -1.64
SSRP1Q08945 SNORA24.1-201ENST00000384401 135 ntBASIC4.82□□□□□ -1.64
SSRP1Q08945 SNORA37-201ENST00000384504 129 ntBASIC4.82□□□□□ -1.64
SSRP1Q08945 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSRP1Q08945 RNU2-29P-201ENST00000410423 189 ntBASIC4.82□□□□□ -1.64
SSRP1Q08945 RNU6-193P-201ENST00000410977 107 ntBASIC4.82□□□□□ -1.64
SSRP1Q08945 HMGB3P9-201ENST00000441799 583 ntBASIC4.82□□□□□ -1.64
SSRP1Q08945 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.82□□□□□ -1.64
SSRP1Q08945 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.82□□□□□ -1.64
SSRP1Q08945 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.82□□□□□ -1.64
SSRP1Q08945 CBWD4P-201ENST00000445695 655 ntBASIC4.82□□□□□ -1.64
SSRP1Q08945 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.82□□□□□ -1.64
SSRP1Q08945 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.82□□□□□ -1.64
SSRP1Q08945 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.82□□□□□ -1.64
SSRP1Q08945 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSRP1Q08945 RNU4-29P-201ENST00000515943 174 ntBASIC4.82□□□□□ -1.64
SSRP1Q08945 RNU6-390P-201ENST00000516259 103 ntBASIC4.82□□□□□ -1.64
SSRP1Q08945 HMGB1P19-201ENST00000517578 577 ntBASIC4.82□□□□□ -1.64
SSRP1Q08945 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.82□□□□□ -1.64
SSRP1Q08945 AP005435.4-201ENST00000529514 284 ntBASIC4.82□□□□□ -1.64
SSRP1Q08945 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.82□□□□□ -1.64
SSRP1Q08945 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.82□□□□□ -1.64
SSRP1Q08945 MIR4703-201ENST00000577728 79 ntBASIC4.82□□□□□ -1.64
SSRP1Q08945 AC006116.10-201ENST00000591836 581 ntBASIC4.82□□□□□ -1.64
SSRP1Q08945 AC004696.1-201ENST00000614345 607 ntBASIC4.82□□□□□ -1.64
SSRP1Q08945 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSRP1Q08945 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSRP1Q08945 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.82□□□□□ -1.64
SSRP1Q08945 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
SSRP1Q08945 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.82□□□□□ -1.64
SSRP1Q08945 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSRP1Q08945 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.82□□□□□ -1.64
SSRP1Q08945 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SSRP1Q08945 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.81□□□□□ -1.64
SSRP1Q08945 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SSRP1Q08945 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.81□□□□□ -1.64
SSRP1Q08945 RNU6-552P-201ENST00000362869 119 ntBASIC4.81□□□□□ -1.64
SSRP1Q08945 RNU6-335P-201ENST00000364563 113 ntBASIC4.81□□□□□ -1.64
SSRP1Q08945 RNU6-61P-201ENST00000365528 109 ntBASIC4.81□□□□□ -1.64
SSRP1Q08945 RNU6-76P-201ENST00000384060 104 ntBASIC4.81□□□□□ -1.64
SSRP1Q08945 RNU6-629P-201ENST00000384061 103 ntBASIC4.81□□□□□ -1.64
SSRP1Q08945 AC114491.1-201ENST00000416095 246 ntBASIC4.81□□□□□ -1.64
SSRP1Q08945 SRIP2-201ENST00000428470 166 ntBASIC4.81□□□□□ -1.64
SSRP1Q08945 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.81□□□□□ -1.64
SSRP1Q08945 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.81□□□□□ -1.64
SSRP1Q08945 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.81□□□□□ -1.64
SSRP1Q08945 AL359073.1-201ENST00000448036 403 ntBASIC4.81□□□□□ -1.64
SSRP1Q08945 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.81□□□□□ -1.64
SSRP1Q08945 RNA5SP246-201ENST00000458909 119 ntBASIC4.81□□□□□ -1.64
SSRP1Q08945 RPL23AP2-201ENST00000471227 466 ntBASIC4.81□□□□□ -1.64
SSRP1Q08945 AC092436.1-201ENST00000506450 503 ntBASIC4.81□□□□□ -1.64
SSRP1Q08945 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.81□□□□□ -1.64
SSRP1Q08945 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SSRP1Q08945 SUMO2P20-201ENST00000520803 283 ntBASIC4.81□□□□□ -1.64
SSRP1Q08945 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.81□□□□□ -1.64
SSRP1Q08945 OR5B10P-201ENST00000532869 642 ntBASIC4.81□□□□□ -1.64
SSRP1Q08945 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.81□□□□□ -1.64
SSRP1Q08945 OR4H12P-201ENST00000556269 907 ntBASIC4.81□□□□□ -1.64
SSRP1Q08945 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.81□□□□□ -1.64
SSRP1Q08945 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.81□□□□□ -1.64
SSRP1Q08945 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.81□□□□□ -1.64
SSRP1Q08945 TAB3P1-202ENST00000452645 1634 ntBASIC4.81□□□□□ -1.64
SSRP1Q08945 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.81□□□□□ -1.64
SSRP1Q08945 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.8□□□□□ -1.64
SSRP1Q08945 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSRP1Q08945 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSRP1Q08945 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSRP1Q08945 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.8□□□□□ -1.64
SSRP1Q08945 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.8□□□□□ -1.64
SSRP1Q08945 RNA5SP235-201ENST00000365411 114 ntBASIC4.8□□□□□ -1.64
SSRP1Q08945 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSRP1Q08945 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSRP1Q08945 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSRP1Q08945 RNU6-767P-201ENST00000384132 107 ntBASIC4.8□□□□□ -1.64
SSRP1Q08945 MIR513A2-201ENST00000385249 127 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms