RNA–Protein interactions for RNA: ENST00000365528.1

RNU6-61P-201, Transcript of RNA, U6 small nuclear 61, pseudogene, humanhuman

BASIC

Gene RNU6-61P, Length 109 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-61P-201ENST00000365528 AEBP2Q6ZN18 517 aaPredicted RBP16.27■□□□□ 0.2
RNU6-61P-201ENST00000365528 CHIC1Q5VXU3 224 aa15.99■□□□□ 0.15
RNU6-61P-201ENST00000365528 PHF23Q9BUL5 403 aaPredicted RBP14.06□□□□□ -0.16
RNU6-61P-201ENST00000365528 SENP3Q9H4L4 574 aaPredicted RBP13.83□□□□□ -0.2
RNU6-61P-201ENST00000365528 PLPPR3Q6T4P5 718 aa13.05□□□□□ -0.32
RNU6-61P-201ENST00000365528 FOXD1Q16676 465 aa12.81□□□□□ -0.36
RNU6-61P-201ENST00000365528 ADRA2BP18089 450 aa12.4□□□□□ -0.42
RNU6-61P-201ENST00000365528 PPP6R1Q9UPN7 881 aa12.39□□□□□ -0.43
RNU6-61P-201ENST00000365528 PIAS4Q8N2W9 510 aaPredicted RBP12.14□□□□□ -0.47
RNU6-61P-201ENST00000365528 MSH5O43196 834 aa11.8□□□□□ -0.52
RNU6-61P-201ENST00000365528 PPP4R3CPQ6ZMV5 832 aa11.51□□□□□ -0.57
RNU6-61P-201ENST00000365528 SCAF1Q9H7N4 1312 aaKnown RBP11.37□□□□□ -0.59
RNU6-61P-201ENST00000365528 KCNA4P22459 653 aa11.34□□□□□ -0.59
RNU6-61P-201ENST00000365528 NCBP3Q53F19 620 aaKnown RBP11.25□□□□□ -0.61
RNU6-61P-201ENST00000365528 MAPK8IP2Q13387 824 aaPredicted RBP11.23□□□□□ -0.61
RNU6-61P-201ENST00000365528 CNKSR2Q8WXI2 1034 aa11.16□□□□□ -0.62
RNU6-61P-201ENST00000365528 NPM3O75607 178 aaKnown RBP11.06□□□□□ -0.64
RNU6-61P-201ENST00000365528 DMRT2Q9Y5R5 561 aa11.04□□□□□ -0.64
RNU6-61P-201ENST00000365528 RNF216Q9NWF9 866 aaPredicted RBP10.91□□□□□ -0.66
RNU6-61P-201ENST00000365528 HOXD11P31277 338 aaPredicted RBP10.83□□□□□ -0.68
RNU6-61P-201ENST00000365528 SLC4A1APQ9BWU0 796 aaKnown RBP10.83□□□□□ -0.68
RNU6-61P-201ENST00000365528 DNAJC5BQ9UF47 199 aa10.66□□□□□ -0.7
RNU6-61P-201ENST00000365528 EHMT2Q96KQ7 1210 aa10.65□□□□□ -0.7
RNU6-61P-201ENST00000365528 DCAF8L1A6NGE4 600 aa10.64□□□□□ -0.71
RNU6-61P-201ENST00000365528 POTEDQ86YR6 584 aa10.58□□□□□ -0.72
RNU6-61P-201ENST00000365528 CSRNP3Q8WYN3 585 aa10.44□□□□□ -0.74
RNU6-61P-201ENST00000365528 ZBTB22O15209 634 aa10.41□□□□□ -0.74
RNU6-61P-201ENST00000365528 FOXD4L1Q9NU39 408 aa10.41□□□□□ -0.74
RNU6-61P-201ENST00000365528 SLC4A2P04920 1241 aa10.4□□□□□ -0.74
RNU6-61P-201ENST00000365528 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.38□□□□□ -0.75
RNU6-61P-201ENST00000365528 MYCNP04198 464 aaPredicted RBP10.23□□□□□ -0.77
RNU6-61P-201ENST00000365528 U3KPZ7 1027 aaPredicted RBP10.18□□□□□ -0.78
RNU6-61P-201ENST00000365528 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.12□□□□□ -0.79
RNU6-61P-201ENST00000365528 HNRNPUL2Q1KMD3 747 aaKnown RBP10.12□□□□□ -0.79
RNU6-61P-201ENST00000365528 RNF39Q9H2S5 420 aa10.09□□□□□ -0.79
RNU6-61P-201ENST00000365528 SAMD1Q6SPF0 538 aaPredicted RBP10.08□□□□□ -0.8
RNU6-61P-201ENST00000365528 ATXN8OSP0DMR3 200 aa10.02□□□□□ -0.81
RNU6-61P-201ENST00000365528 APLP2Q06481 763 aa10□□□□□ -0.81
RNU6-61P-201ENST00000365528 C1QBPQ07021 282 aaKnown RBP9.99□□□□□ -0.81
RNU6-61P-201ENST00000365528 ATF5Q9Y2D1 282 aaPredicted RBP9.93□□□□□ -0.82
RNU6-61P-201ENST00000365528 CAPN15O75808 1086 aa9.88□□□□□ -0.83
RNU6-61P-201ENST00000365528 SPINK5Q9NQ38 1064 aaPredicted RBP9.88□□□□□ -0.83
RNU6-61P-201ENST00000365528 TRHP20396 242 aaPredicted RBP9.86□□□□□ -0.83
RNU6-61P-201ENST00000365528 ZNF219Q9P2Y4 722 aaPredicted RBP9.83□□□□□ -0.84
RNU6-61P-201ENST00000365528 CACNB1Q02641 598 aaPredicted RBP9.81□□□□□ -0.84
RNU6-61P-201ENST00000365528 POLA2Q14181 598 aa9.7□□□□□ -0.86
RNU6-61P-201ENST00000365528 ABCB7O75027 752 aa9.69□□□□□ -0.86
RNU6-61P-201ENST00000365528 DSG3P32926 999 aa9.64□□□□□ -0.87
RNU6-61P-201ENST00000365528 FBLN2P98095 1184 aa9.56□□□□□ -0.88
RNU6-61P-201ENST00000365528 ZBTB12Q9Y330 459 aaPredicted RBP9.54□□□□□ -0.88
RNU6-61P-201ENST00000365528 MKRN4PQ13434 485 aaPredicted RBP9.49□□□□□ -0.89
RNU6-61P-201ENST00000365528 FKBP8Q14318 412 aa9.47□□□□□ -0.89
RNU6-61P-201ENST00000365528 SPDYE4A6NLX3 237 aa9.37□□□□□ -0.91
RNU6-61P-201ENST00000365528 OSCARQ8IYS5 282 aa9.36□□□□□ -0.91
RNU6-61P-201ENST00000365528 ZNF692Q9BU19 519 aaPredicted RBP9.28□□□□□ -0.92
RNU6-61P-201ENST00000365528 SPDYE2BA6NHP3 402 aa9.27□□□□□ -0.93
RNU6-61P-201ENST00000365528 SPDYE6P0CI01 402 aa9.27□□□□□ -0.93
RNU6-61P-201ENST00000365528 SPDYE2Q495Y8 402 aa9.27□□□□□ -0.93
RNU6-61P-201ENST00000365528 RBM42Q9BTD8 480 aaKnown RBP9.21□□□□□ -0.94
RNU6-61P-201ENST00000365528 SSUH2Q9Y2M2 353 aa9.19□□□□□ -0.94
RNU6-61P-201ENST00000365528 PROM2Q8N271 834 aa9.16□□□□□ -0.94
RNU6-61P-201ENST00000365528 PABPN1Q86U42 306 aaKnown RBP eCLIP9.15□□□□□ -0.94
RNU6-61P-201ENST00000365528 FBXO3Q9UK99 471 aa9.11□□□□□ -0.95
RNU6-61P-201ENST00000365528 AKT1S1Q96B36 256 aa9.1□□□□□ -0.95
RNU6-61P-201ENST00000365528 REM2Q8IYK8 340 aaPredicted RBP9.02□□□□□ -0.97
RNU6-61P-201ENST00000365528 STAG3Q9UJ98 1225 aa9.02□□□□□ -0.97
RNU6-61P-201ENST00000365528 SPDYE1Q8NFV5 336 aaPredicted RBP9□□□□□ -0.97
RNU6-61P-201ENST00000365528 CLEC11AQ9Y240 323 aa8.99□□□□□ -0.97
RNU6-61P-201ENST00000365528 VASPP50552 380 aaPredicted RBP8.96□□□□□ -0.98
RNU6-61P-201ENST00000365528 PITPNM1O00562 1244 aa8.92□□□□□ -0.98
RNU6-61P-201ENST00000365528 PRR29P0C7W0 189 aa8.9□□□□□ -0.98
RNU6-61P-201ENST00000365528 MIER1Q8N108 512 aa8.9□□□□□ -0.98
RNU6-61P-201ENST00000365528 PLCD3Q8N3E9 789 aa8.9□□□□□ -0.98
RNU6-61P-201ENST00000365528 PLEKHG5O94827 1062 aa8.87□□□□□ -0.99
RNU6-61P-201ENST00000365528 IFNLR1Q8IU57 520 aaPredicted RBP8.84□□□□□ -0.99
RNU6-61P-201ENST00000365528 KLHL34Q8N239 644 aa8.84□□□□□ -0.99
RNU6-61P-201ENST00000365528 CHRDL2Q6WN34 429 aa8.79□□□□□ -1
RNU6-61P-201ENST00000365528 ZBTB47Q9UFB7 747 aaPredicted RBP8.79□□□□□ -1
RNU6-61P-201ENST00000365528 AMER1Q5JTC6 1135 aaPredicted RBP8.77□□□□□ -1.01
RNU6-61P-201ENST00000365528 CREBZFQ9NS37 354 aa8.77□□□□□ -1.01
RNU6-61P-201ENST00000365528 SPOCK2Q92563 424 aa8.74□□□□□ -1.01
RNU6-61P-201ENST00000365528 RTN4Q9NQC3 1192 aaKnown RBP8.74□□□□□ -1.01
RNU6-61P-201ENST00000365528 CHADLQ6NUI6 762 aa8.73□□□□□ -1.01
RNU6-61P-201ENST00000365528 PRKAR2AP13861 404 aaKnown RBP8.71□□□□□ -1.02
RNU6-61P-201ENST00000365528 FXR2P51116 673 aaKnown RBP eCLIP8.71□□□□□ -1.02
RNU6-61P-201ENST00000365528 PIP4P2Q8N4L2 257 aa8.68□□□□□ -1.02
RNU6-61P-201ENST00000365528 MNX1P50219 401 aaPredicted RBP8.67□□□□□ -1.02
RNU6-61P-201ENST00000365528 NPM1P06748 294 aaKnown RBP eCLIP8.66□□□□□ -1.02
RNU6-61P-201ENST00000365528 FARP1Q9Y4F1 1045 aaPredicted RBP8.64□□□□□ -1.03
RNU6-61P-201ENST00000365528 CIZ1Q9ULV3 898 aaPredicted RBP8.62□□□□□ -1.03
RNU6-61P-201ENST00000365528 NUBP1P53384 320 aa8.6□□□□□ -1.03
RNU6-61P-201ENST00000365528 DCAF8Q5TAQ9 597 aa8.59□□□□□ -1.03
RNU6-61P-201ENST00000365528 FAM212AQ96EL1 285 aa8.58□□□□□ -1.04
RNU6-61P-201ENST00000365528 PKD2Q13563 968 aa8.57□□□□□ -1.04
RNU6-61P-201ENST00000365528 GSE1Q14687 1217 aa8.57□□□□□ -1.04
RNU6-61P-201ENST00000365528 RASEFQ8IZ41 740 aa8.57□□□□□ -1.04
RNU6-61P-201ENST00000365528 ECM2O94769 699 aaPredicted RBP8.54□□□□□ -1.04
RNU6-61P-201ENST00000365528 TSPYL2Q9H2G4 693 aaPredicted RBP8.53□□□□□ -1.04
RNU6-61P-201ENST00000365528 PAK3O75914 559 aaPredicted RBP8.51□□□□□ -1.05
RNU6-61P-201ENST00000365528 TRIM41Q8WV44 630 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms