RNA–Protein interactions for RNA: ENST00000620759.1

CDKN3-212, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-212ENST00000620759 AEBP2Q6ZN18 517 aaPredicted RBP23.22■■□□□ 1.31
CDKN3-212ENST00000620759 CHIC1Q5VXU3 224 aa22.17■■□□□ 1.14
CDKN3-212ENST00000620759 SENP3Q9H4L4 574 aaPredicted RBP19.94■□□□□ 0.78
CDKN3-212ENST00000620759 PHF23Q9BUL5 403 aaPredicted RBP19.62■□□□□ 0.73
CDKN3-212ENST00000620759 FOXD1Q16676 465 aa18.48■□□□□ 0.55
CDKN3-212ENST00000620759 PLPPR3Q6T4P5 718 aa17.79■□□□□ 0.44
CDKN3-212ENST00000620759 MSH5O43196 834 aa17.39■□□□□ 0.37
CDKN3-212ENST00000620759 PIAS4Q8N2W9 510 aaPredicted RBP17.35■□□□□ 0.37
CDKN3-212ENST00000620759 PPP6R1Q9UPN7 881 aa17.28■□□□□ 0.36
CDKN3-212ENST00000620759 ADRA2BP18089 450 aa17.25■□□□□ 0.35
CDKN3-212ENST00000620759 POTEDQ86YR6 584 aa16.79■□□□□ 0.28
CDKN3-212ENST00000620759 SCAF1Q9H7N4 1312 aaKnown RBP15.94■□□□□ 0.14
CDKN3-212ENST00000620759 MAPK8IP2Q13387 824 aaPredicted RBP15.8■□□□□ 0.12
CDKN3-212ENST00000620759 DMRT2Q9Y5R5 561 aa15.78■□□□□ 0.12
CDKN3-212ENST00000620759 PPP4R3CPQ6ZMV5 832 aa15.56■□□□□ 0.08
CDKN3-212ENST00000620759 CNKSR2Q8WXI2 1034 aa15.29■□□□□ 0.04
CDKN3-212ENST00000620759 HOXD11P31277 338 aaPredicted RBP15.21■□□□□ 0.03
CDKN3-212ENST00000620759 DCAF8L1A6NGE4 600 aa15.16■□□□□ 0.02
CDKN3-212ENST00000620759 RNF216Q9NWF9 866 aaPredicted RBP15.14■□□□□ 0.01
CDKN3-212ENST00000620759 NCBP3Q53F19 620 aaKnown RBP15.07■□□□□ 0
CDKN3-212ENST00000620759 CACNB1Q02641 598 aaPredicted RBP14.87□□□□□ -0.03
CDKN3-212ENST00000620759 RNF39Q9H2S5 420 aa14.78□□□□□ -0.04
CDKN3-212ENST00000620759 NPM3O75607 178 aaKnown RBP14.74□□□□□ -0.05
CDKN3-212ENST00000620759 DNAJC5BQ9UF47 199 aa14.73□□□□□ -0.05
CDKN3-212ENST00000620759 C1QBPQ07021 282 aaKnown RBP14.62□□□□□ -0.07
CDKN3-212ENST00000620759 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.54□□□□□ -0.08
CDKN3-212ENST00000620759 KCNA4P22459 653 aa14.48□□□□□ -0.09
CDKN3-212ENST00000620759 U3KPZ7 1027 aaPredicted RBP14.17□□□□□ -0.14
CDKN3-212ENST00000620759 SLC4A2P04920 1241 aa14.03□□□□□ -0.16
CDKN3-212ENST00000620759 CAPN15O75808 1086 aa13.98□□□□□ -0.17
CDKN3-212ENST00000620759 APLP2Q06481 763 aa13.95□□□□□ -0.18
CDKN3-212ENST00000620759 SPINK5Q9NQ38 1064 aaPredicted RBP13.93□□□□□ -0.18
CDKN3-212ENST00000620759 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.92□□□□□ -0.18
CDKN3-212ENST00000620759 HNRNPUL2Q1KMD3 747 aaKnown RBP13.92□□□□□ -0.18
CDKN3-212ENST00000620759 DSG3P32926 999 aa13.84□□□□□ -0.19
CDKN3-212ENST00000620759 SAMD1Q6SPF0 538 aaPredicted RBP13.81□□□□□ -0.2
CDKN3-212ENST00000620759 ZNF219Q9P2Y4 722 aaPredicted RBP13.78□□□□□ -0.2
CDKN3-212ENST00000620759 TRHP20396 242 aaPredicted RBP13.76□□□□□ -0.21
CDKN3-212ENST00000620759 SLC4A1APQ9BWU0 796 aaKnown RBP13.74□□□□□ -0.21
CDKN3-212ENST00000620759 MYCNP04198 464 aaPredicted RBP13.7□□□□□ -0.22
CDKN3-212ENST00000620759 ABCB7O75027 752 aa13.62□□□□□ -0.23
CDKN3-212ENST00000620759 FOXD4L1Q9NU39 408 aa13.56□□□□□ -0.24
CDKN3-212ENST00000620759 POLA2Q14181 598 aa13.39□□□□□ -0.27
CDKN3-212ENST00000620759 RBM42Q9BTD8 480 aaKnown RBP13.32□□□□□ -0.28
CDKN3-212ENST00000620759 ZBTB22O15209 634 aa13.27□□□□□ -0.29
CDKN3-212ENST00000620759 ATF5Q9Y2D1 282 aaPredicted RBP13.26□□□□□ -0.29
CDKN3-212ENST00000620759 ZBTB12Q9Y330 459 aaPredicted RBP13.23□□□□□ -0.29
CDKN3-212ENST00000620759 POTEHQ6S545 545 aa13.21□□□□□ -0.29
CDKN3-212ENST00000620759 ATXN8OSP0DMR3 200 aa13.17□□□□□ -0.3
CDKN3-212ENST00000620759 AKT1S1Q96B36 256 aa12.98□□□□□ -0.33
CDKN3-212ENST00000620759 OSCARQ8IYS5 282 aa12.95□□□□□ -0.34
CDKN3-212ENST00000620759 CHRDL2Q6WN34 429 aa12.94□□□□□ -0.34
CDKN3-212ENST00000620759 FBLN2P98095 1184 aa12.9□□□□□ -0.34
CDKN3-212ENST00000620759 REM2Q8IYK8 340 aaPredicted RBP12.81□□□□□ -0.36
CDKN3-212ENST00000620759 SPDYE2BA6NHP3 402 aa12.77□□□□□ -0.37
CDKN3-212ENST00000620759 SPDYE6P0CI01 402 aa12.77□□□□□ -0.37
CDKN3-212ENST00000620759 SPDYE2Q495Y8 402 aa12.77□□□□□ -0.37
CDKN3-212ENST00000620759 CSRNP3Q8WYN3 585 aa12.73□□□□□ -0.37
CDKN3-212ENST00000620759 MKRN4PQ13434 485 aaPredicted RBP12.67□□□□□ -0.38
CDKN3-212ENST00000620759 PITPNM1O00562 1244 aa12.66□□□□□ -0.38
CDKN3-212ENST00000620759 EHMT2Q96KQ7 1210 aa12.63□□□□□ -0.39
CDKN3-212ENST00000620759 PIP4P2Q8N4L2 257 aa12.61□□□□□ -0.39
CDKN3-212ENST00000620759 ZNF692Q9BU19 519 aaPredicted RBP12.6□□□□□ -0.39
CDKN3-212ENST00000620759 SSUH2Q9Y2M2 353 aa12.56□□□□□ -0.4
CDKN3-212ENST00000620759 FXR2P51116 673 aaKnown RBP eCLIP12.55□□□□□ -0.4
CDKN3-212ENST00000620759 SPDYE1Q8NFV5 336 aaPredicted RBP12.55□□□□□ -0.4
CDKN3-212ENST00000620759 CLEC11AQ9Y240 323 aa12.49□□□□□ -0.41
CDKN3-212ENST00000620759 HAX1O00165 279 aa12.41□□□□□ -0.42
CDKN3-212ENST00000620759 SP7Q8TDD2 431 aaPredicted RBP12.41□□□□□ -0.42
CDKN3-212ENST00000620759 PABPN1Q86U42 306 aaKnown RBP eCLIP12.4□□□□□ -0.42
CDKN3-212ENST00000620759 PRKAR2AP13861 404 aaKnown RBP12.36□□□□□ -0.43
CDKN3-212ENST00000620759 PRR29P0C7W0 189 aa12.31□□□□□ -0.44
CDKN3-212ENST00000620759 SPDYE4A6NLX3 237 aa12.18□□□□□ -0.46
CDKN3-212ENST00000620759 CHADLQ6NUI6 762 aa12.18□□□□□ -0.46
CDKN3-212ENST00000620759 C19orf67A6NJJ6 358 aa12.15□□□□□ -0.46
CDKN3-212ENST00000620759 STAG3Q9UJ98 1225 aa12.15□□□□□ -0.46
CDKN3-212ENST00000620759 EVX2Q03828 476 aa12.14□□□□□ -0.47
CDKN3-212ENST00000620759 FARP1Q9Y4F1 1045 aaPredicted RBP12.06□□□□□ -0.48
CDKN3-212ENST00000620759 CD44P16070 742 aaKnown RBP11.98□□□□□ -0.49
CDKN3-212ENST00000620759 GABBR2O75899 941 aa11.95□□□□□ -0.5
CDKN3-212ENST00000620759 CREBZFQ9NS37 354 aa11.94□□□□□ -0.5
CDKN3-212ENST00000620759 CLCN6P51797 869 aa11.9□□□□□ -0.5
CDKN3-212ENST00000620759 PROM2Q8N271 834 aa11.84□□□□□ -0.51
CDKN3-212ENST00000620759 NPM1P06748 294 aaKnown RBP eCLIP11.83□□□□□ -0.52
CDKN3-212ENST00000620759 PAK3O75914 559 aaPredicted RBP11.82□□□□□ -0.52
CDKN3-212ENST00000620759 ZRANB1Q9UGI0 708 aa11.82□□□□□ -0.52
CDKN3-212ENST00000620759 ZNF579Q8NAF0 562 aaKnown RBP11.79□□□□□ -0.52
CDKN3-212ENST00000620759 PLEKHG5O94827 1062 aa11.72□□□□□ -0.53
CDKN3-212ENST00000620759 MNX1P50219 401 aaPredicted RBP11.72□□□□□ -0.53
CDKN3-212ENST00000620759 DCBLD2Q96PD2 775 aa11.71□□□□□ -0.53
CDKN3-212ENST00000620759 LHX8Q68G74 356 aa11.64□□□□□ -0.55
CDKN3-212ENST00000620759 POTEIP0CG38 1075 aa11.63□□□□□ -0.55
CDKN3-212ENST00000620759 MIER1Q8N108 512 aa11.63□□□□□ -0.55
CDKN3-212ENST00000620759 PHF12Q96QT6 1004 aa11.62□□□□□ -0.55
CDKN3-212ENST00000620759 GALR2O43603 387 aaPredicted RBP11.61□□□□□ -0.55
CDKN3-212ENST00000620759 FKBP8Q14318 412 aa11.6□□□□□ -0.55
CDKN3-212ENST00000620759 PLCD3Q8N3E9 789 aa11.56□□□□□ -0.56
CDKN3-212ENST00000620759 TSPYL2Q9H2G4 693 aaPredicted RBP11.55□□□□□ -0.56
CDKN3-212ENST00000620759 ZBTB47Q9UFB7 747 aaPredicted RBP11.53□□□□□ -0.56
CDKN3-212ENST00000620759 MS4A3Q96HJ5 214 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms