RNA–Protein interactions for RNA: ENST00000371413.4

LGI1-201, Transcript of leucine rich glioma inactivated 1, humanhuman

TSL 1 (best) BASIC

Gene LGI1, Length 1,247 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1-201ENST00000371413 AEBP2Q6ZN18 517 aaPredicted RBP22.26■■□□□ 1.15
LGI1-201ENST00000371413 CHIC1Q5VXU3 224 aa21.06■□□□□ 0.96
LGI1-201ENST00000371413 SENP3Q9H4L4 574 aaPredicted RBP19.04■□□□□ 0.64
LGI1-201ENST00000371413 PHF23Q9BUL5 403 aaPredicted RBP18.79■□□□□ 0.6
LGI1-201ENST00000371413 FOXD1Q16676 465 aa17.75■□□□□ 0.43
LGI1-201ENST00000371413 PLPPR3Q6T4P5 718 aa16.8■□□□□ 0.28
LGI1-201ENST00000371413 POTEDQ86YR6 584 aa16.74■□□□□ 0.27
LGI1-201ENST00000371413 MSH5O43196 834 aa16.67■□□□□ 0.26
LGI1-201ENST00000371413 PIAS4Q8N2W9 510 aaPredicted RBP16.56■□□□□ 0.24
LGI1-201ENST00000371413 PPP6R1Q9UPN7 881 aa16.51■□□□□ 0.23
LGI1-201ENST00000371413 ADRA2BP18089 450 aa16.46■□□□□ 0.23
LGI1-201ENST00000371413 MAPK8IP2Q13387 824 aaPredicted RBP15.16■□□□□ 0.02
LGI1-201ENST00000371413 SCAF1Q9H7N4 1312 aaKnown RBP15.12■□□□□ 0.01
LGI1-201ENST00000371413 DMRT2Q9Y5R5 561 aa15.07■□□□□ 0
LGI1-201ENST00000371413 PPP4R3CPQ6ZMV5 832 aa14.71□□□□□ -0.05
LGI1-201ENST00000371413 DCAF8L1A6NGE4 600 aa14.5□□□□□ -0.09
LGI1-201ENST00000371413 HOXD11P31277 338 aaPredicted RBP14.47□□□□□ -0.09
LGI1-201ENST00000371413 CNKSR2Q8WXI2 1034 aa14.46□□□□□ -0.09
LGI1-201ENST00000371413 CACNB1Q02641 598 aaPredicted RBP14.39□□□□□ -0.11
LGI1-201ENST00000371413 RNF216Q9NWF9 866 aaPredicted RBP14.35□□□□□ -0.11
LGI1-201ENST00000371413 RNF39Q9H2S5 420 aa14.2□□□□□ -0.14
LGI1-201ENST00000371413 NCBP3Q53F19 620 aaKnown RBP14.14□□□□□ -0.15
LGI1-201ENST00000371413 C1QBPQ07021 282 aaKnown RBP14.01□□□□□ -0.17
LGI1-201ENST00000371413 DNAJC5BQ9UF47 199 aa14.01□□□□□ -0.17
LGI1-201ENST00000371413 NPM3O75607 178 aaKnown RBP13.89□□□□□ -0.19
LGI1-201ENST00000371413 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.83□□□□□ -0.2
LGI1-201ENST00000371413 KCNA4P22459 653 aa13.52□□□□□ -0.25
LGI1-201ENST00000371413 U3KPZ7 1027 aaPredicted RBP13.48□□□□□ -0.25
LGI1-201ENST00000371413 CAPN15O75808 1086 aa13.34□□□□□ -0.27
LGI1-201ENST00000371413 SPINK5Q9NQ38 1064 aaPredicted RBP13.33□□□□□ -0.28
LGI1-201ENST00000371413 SLC4A2P04920 1241 aa13.28□□□□□ -0.28
LGI1-201ENST00000371413 DSG3P32926 999 aa13.26□□□□□ -0.29
LGI1-201ENST00000371413 APLP2Q06481 763 aa13.16□□□□□ -0.3
LGI1-201ENST00000371413 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.11□□□□□ -0.31
LGI1-201ENST00000371413 HNRNPUL2Q1KMD3 747 aaKnown RBP13.11□□□□□ -0.31
LGI1-201ENST00000371413 TRHP20396 242 aaPredicted RBP13.1□□□□□ -0.31
LGI1-201ENST00000371413 ZNF219Q9P2Y4 722 aaPredicted RBP13.07□□□□□ -0.32
LGI1-201ENST00000371413 SAMD1Q6SPF0 538 aaPredicted RBP13.02□□□□□ -0.33
LGI1-201ENST00000371413 ABCB7O75027 752 aa13□□□□□ -0.33
LGI1-201ENST00000371413 POTEHQ6S545 545 aa12.95□□□□□ -0.34
LGI1-201ENST00000371413 MYCNP04198 464 aaPredicted RBP12.86□□□□□ -0.35
LGI1-201ENST00000371413 SLC4A1APQ9BWU0 796 aaKnown RBP12.77□□□□□ -0.37
LGI1-201ENST00000371413 POLA2Q14181 598 aa12.72□□□□□ -0.37
LGI1-201ENST00000371413 RBM42Q9BTD8 480 aaKnown RBP12.68□□□□□ -0.38
LGI1-201ENST00000371413 FOXD4L1Q9NU39 408 aa12.66□□□□□ -0.38
LGI1-201ENST00000371413 ATF5Q9Y2D1 282 aaPredicted RBP12.55□□□□□ -0.4
LGI1-201ENST00000371413 ZBTB12Q9Y330 459 aaPredicted RBP12.46□□□□□ -0.41
LGI1-201ENST00000371413 CHRDL2Q6WN34 429 aa12.43□□□□□ -0.42
LGI1-201ENST00000371413 ZBTB22O15209 634 aa12.41□□□□□ -0.42
LGI1-201ENST00000371413 AKT1S1Q96B36 256 aa12.36□□□□□ -0.43
LGI1-201ENST00000371413 ATXN8OSP0DMR3 200 aa12.31□□□□□ -0.44
LGI1-201ENST00000371413 OSCARQ8IYS5 282 aa12.28□□□□□ -0.44
LGI1-201ENST00000371413 REM2Q8IYK8 340 aaPredicted RBP12.24□□□□□ -0.45
LGI1-201ENST00000371413 FBLN2P98095 1184 aa12.12□□□□□ -0.47
LGI1-201ENST00000371413 PIP4P2Q8N4L2 257 aa12.1□□□□□ -0.47
LGI1-201ENST00000371413 PITPNM1O00562 1244 aa12.09□□□□□ -0.47
LGI1-201ENST00000371413 SPDYE2BA6NHP3 402 aa12.05□□□□□ -0.48
LGI1-201ENST00000371413 SPDYE6P0CI01 402 aa12.05□□□□□ -0.48
LGI1-201ENST00000371413 SPDYE2Q495Y8 402 aa12.05□□□□□ -0.48
LGI1-201ENST00000371413 FXR2P51116 673 aaKnown RBP eCLIP12.01□□□□□ -0.49
LGI1-201ENST00000371413 SP7Q8TDD2 431 aaPredicted RBP12.01□□□□□ -0.49
LGI1-201ENST00000371413 MKRN4PQ13434 485 aaPredicted RBP11.97□□□□□ -0.49
LGI1-201ENST00000371413 HAX1O00165 279 aa11.95□□□□□ -0.5
LGI1-201ENST00000371413 ZNF692Q9BU19 519 aaPredicted RBP11.92□□□□□ -0.5
LGI1-201ENST00000371413 SPDYE1Q8NFV5 336 aaPredicted RBP11.88□□□□□ -0.51
LGI1-201ENST00000371413 CLEC11AQ9Y240 323 aa11.88□□□□□ -0.51
LGI1-201ENST00000371413 SSUH2Q9Y2M2 353 aa11.86□□□□□ -0.51
LGI1-201ENST00000371413 PRKAR2AP13861 404 aaKnown RBP11.8□□□□□ -0.52
LGI1-201ENST00000371413 CSRNP3Q8WYN3 585 aa11.77□□□□□ -0.53
LGI1-201ENST00000371413 EVX2Q03828 476 aa11.75□□□□□ -0.53
LGI1-201ENST00000371413 PABPN1Q86U42 306 aaKnown RBP eCLIP11.72□□□□□ -0.53
LGI1-201ENST00000371413 PRR29P0C7W0 189 aa11.67□□□□□ -0.54
LGI1-201ENST00000371413 C19orf67A6NJJ6 358 aa11.64□□□□□ -0.55
LGI1-201ENST00000371413 CHADLQ6NUI6 762 aa11.64□□□□□ -0.55
LGI1-201ENST00000371413 EHMT2Q96KQ7 1210 aa11.56□□□□□ -0.56
LGI1-201ENST00000371413 GABBR2O75899 941 aa11.5□□□□□ -0.57
LGI1-201ENST00000371413 FARP1Q9Y4F1 1045 aaPredicted RBP11.46□□□□□ -0.57
LGI1-201ENST00000371413 CD44P16070 742 aaKnown RBP11.42□□□□□ -0.58
LGI1-201ENST00000371413 STAG3Q9UJ98 1225 aa11.4□□□□□ -0.58
LGI1-201ENST00000371413 SPDYE4A6NLX3 237 aa11.38□□□□□ -0.59
LGI1-201ENST00000371413 CLCN6P51797 869 aa11.32□□□□□ -0.6
LGI1-201ENST00000371413 CREBZFQ9NS37 354 aa11.32□□□□□ -0.6
LGI1-201ENST00000371413 LHX8Q68G74 356 aa11.28□□□□□ -0.6
LGI1-201ENST00000371413 ZRANB1Q9UGI0 708 aa11.25□□□□□ -0.61
LGI1-201ENST00000371413 POTEIP0CG38 1075 aa11.24□□□□□ -0.61
LGI1-201ENST00000371413 ZNF579Q8NAF0 562 aaKnown RBP11.22□□□□□ -0.61
LGI1-201ENST00000371413 DCBLD2Q96PD2 775 aa11.2□□□□□ -0.62
LGI1-201ENST00000371413 PAK3O75914 559 aaPredicted RBP11.16□□□□□ -0.62
LGI1-201ENST00000371413 NPM1P06748 294 aaKnown RBP eCLIP11.15□□□□□ -0.62
LGI1-201ENST00000371413 MNX1P50219 401 aaPredicted RBP11.1□□□□□ -0.63
LGI1-201ENST00000371413 GALR2O43603 387 aaPredicted RBP11.09□□□□□ -0.63
LGI1-201ENST00000371413 PHF12Q96QT6 1004 aa11.06□□□□□ -0.64
LGI1-201ENST00000371413 PROM2Q8N271 834 aa11.05□□□□□ -0.64
LGI1-201ENST00000371413 TSPYL2Q9H2G4 693 aaPredicted RBP10.93□□□□□ -0.66
LGI1-201ENST00000371413 PLEKHG5O94827 1062 aa10.91□□□□□ -0.66
LGI1-201ENST00000371413 MIER1Q8N108 512 aa10.9□□□□□ -0.66
LGI1-201ENST00000371413 MS4A3Q96HJ5 214 aa10.9□□□□□ -0.66
LGI1-201ENST00000371413 PLSCR2Q9NRY7 297 aa10.9□□□□□ -0.66
LGI1-201ENST00000371413 PELP1Q8IZL8 1130 aaKnown RBP10.89□□□□□ -0.67
LGI1-201ENST00000371413 POTEB2H3BUK9 544 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms