Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 KIAA1217-201ENST00000307544 3281 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 APEX2-201ENST00000374987 3245 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 ZNF512-201ENST00000355467 3541 ntAPPRIS P2 TSL 2 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 CYP4A11-203ENST00000371905 1725 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 ZNF248-208ENST00000611278 4204 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 RMST-209ENST00000639542 3269 ntTSL 5 BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 CCR4-201ENST00000330953 3095 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 HDAC9-212ENST00000432645 3099 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 AL022323.2-201ENST00000623239 3000 ntBASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 ELMO2-202ENST00000352077 2157 ntAPPRIS ALT1 TSL 5 BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 SERPINB8-202ENST00000353706 3387 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 MRO-211ENST00000610511 5257 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 RN7SKP184-201ENST00000362348 333 ntBASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 RN7SKP173-201ENST00000362821 315 ntBASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 RNA5SP463-201ENST00000363030 120 ntBASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 RMRP-202ENST00000363046 264 ntBASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 RNU4-81P-201ENST00000363561 144 ntBASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 RN7SKP93-201ENST00000363838 309 ntBASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 IGLV11-55-201ENST00000390286 381 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 SNORD90-201ENST00000391145 111 ntBASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 RNA5SP354-201ENST00000391247 136 ntBASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 IGLC6-201ENST00000410078 317 ntBASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 AC023141.4-201ENST00000412031 328 ntBASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 AL513302.1-201ENST00000415679 428 ntBASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 POLR2J4-204ENST00000418424 324 ntBASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 LINCMD1-201ENST00000418518 462 ntTSL 5 BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 RPSAP1-201ENST00000421328 880 ntBASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 AC116050.1-206ENST00000423774 213 ntBASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 AL353705.1-201ENST00000433468 480 ntBASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 AC023141.8-201ENST00000442554 208 ntBASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 AC010401.1-201ENST00000463867 348 ntBASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 RN7SL218P-201ENST00000464637 299 ntBASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 RN7SL269P-201ENST00000467795 305 ntBASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 RNU6-752P-201ENST00000516376 102 ntBASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 RNU6-231P-201ENST00000517122 103 ntBASIC1.51□□□□□ -2.17
KRTAP4-4Q9BYR3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms