RNA–Protein interactions for RNA: ENST00000418424.2

POLR2J4-204, Transcript of RNA polymerase II subunit J4, pseudogene, humanhuman

BASIC

Gene POLR2J4, Length 324 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J4-204ENST00000418424 AEBP2Q6ZN18 517 aaPredicted RBP10.12□□□□□ -0.79
POLR2J4-204ENST00000418424 CHIC1Q5VXU3 224 aa9.5□□□□□ -0.89
POLR2J4-204ENST00000418424 SENP3Q9H4L4 574 aaPredicted RBP8.68□□□□□ -1.02
POLR2J4-204ENST00000418424 PHF23Q9BUL5 403 aaPredicted RBP8.56□□□□□ -1.04
POLR2J4-204ENST00000418424 FOXD1Q16676 465 aa8.09□□□□□ -1.11
POLR2J4-204ENST00000418424 MSH5O43196 834 aa7.63□□□□□ -1.19
POLR2J4-204ENST00000418424 POTEDQ86YR6 584 aa7.63□□□□□ -1.19
POLR2J4-204ENST00000418424 PLPPR3Q6T4P5 718 aa7.57□□□□□ -1.2
POLR2J4-204ENST00000418424 PIAS4Q8N2W9 510 aaPredicted RBP7.57□□□□□ -1.2
POLR2J4-204ENST00000418424 ADRA2BP18089 450 aa7.48□□□□□ -1.21
POLR2J4-204ENST00000418424 PPP6R1Q9UPN7 881 aa7.48□□□□□ -1.21
POLR2J4-204ENST00000418424 MAPK8IP2Q13387 824 aaPredicted RBP6.9□□□□□ -1.3
POLR2J4-204ENST00000418424 SCAF1Q9H7N4 1312 aaKnown RBP6.86□□□□□ -1.31
POLR2J4-204ENST00000418424 DMRT2Q9Y5R5 561 aa6.85□□□□□ -1.31
POLR2J4-204ENST00000418424 DCAF8L1A6NGE4 600 aa6.69□□□□□ -1.34
POLR2J4-204ENST00000418424 CACNB1Q02641 598 aaPredicted RBP6.66□□□□□ -1.34
POLR2J4-204ENST00000418424 PPP4R3CPQ6ZMV5 832 aa6.63□□□□□ -1.35
POLR2J4-204ENST00000418424 HOXD11P31277 338 aaPredicted RBP6.53□□□□□ -1.36
POLR2J4-204ENST00000418424 CNKSR2Q8WXI2 1034 aa6.52□□□□□ -1.37
POLR2J4-204ENST00000418424 RNF216Q9NWF9 866 aaPredicted RBP6.48□□□□□ -1.37
POLR2J4-204ENST00000418424 RNF39Q9H2S5 420 aa6.47□□□□□ -1.37
POLR2J4-204ENST00000418424 C1QBPQ07021 282 aaKnown RBP6.39□□□□□ -1.39
POLR2J4-204ENST00000418424 NCBP3Q53F19 620 aaKnown RBP6.37□□□□□ -1.39
POLR2J4-204ENST00000418424 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.31□□□□□ -1.4
POLR2J4-204ENST00000418424 DNAJC5BQ9UF47 199 aa6.29□□□□□ -1.4
POLR2J4-204ENST00000418424 NPM3O75607 178 aaKnown RBP6.24□□□□□ -1.41
POLR2J4-204ENST00000418424 CAPN15O75808 1086 aa6.11□□□□□ -1.43
POLR2J4-204ENST00000418424 U3KPZ7 1027 aaPredicted RBP6.11□□□□□ -1.43
POLR2J4-204ENST00000418424 SPINK5Q9NQ38 1064 aaPredicted RBP6.07□□□□□ -1.44
POLR2J4-204ENST00000418424 DSG3P32926 999 aa6.03□□□□□ -1.44
POLR2J4-204ENST00000418424 KCNA4P22459 653 aa6.02□□□□□ -1.45
POLR2J4-204ENST00000418424 TRHP20396 242 aaPredicted RBP6□□□□□ -1.45
POLR2J4-204ENST00000418424 APLP2Q06481 763 aa5.97□□□□□ -1.45
POLR2J4-204ENST00000418424 POTEHQ6S545 545 aa5.97□□□□□ -1.45
POLR2J4-204ENST00000418424 ABCB7O75027 752 aa5.96□□□□□ -1.46
POLR2J4-204ENST00000418424 SLC4A2P04920 1241 aa5.96□□□□□ -1.46
POLR2J4-204ENST00000418424 ZNF219Q9P2Y4 722 aaPredicted RBP5.93□□□□□ -1.46
POLR2J4-204ENST00000418424 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.92□□□□□ -1.46
POLR2J4-204ENST00000418424 HNRNPUL2Q1KMD3 747 aaKnown RBP5.92□□□□□ -1.46
POLR2J4-204ENST00000418424 SAMD1Q6SPF0 538 aaPredicted RBP5.88□□□□□ -1.47
POLR2J4-204ENST00000418424 RBM42Q9BTD8 480 aaKnown RBP5.79□□□□□ -1.48
POLR2J4-204ENST00000418424 MYCNP04198 464 aaPredicted RBP5.78□□□□□ -1.48
POLR2J4-204ENST00000418424 POLA2Q14181 598 aa5.78□□□□□ -1.48
POLR2J4-204ENST00000418424 CHRDL2Q6WN34 429 aa5.7□□□□□ -1.5
POLR2J4-204ENST00000418424 SLC4A1APQ9BWU0 796 aaKnown RBP5.69□□□□□ -1.5
POLR2J4-204ENST00000418424 FOXD4L1Q9NU39 408 aa5.65□□□□□ -1.5
POLR2J4-204ENST00000418424 ATF5Q9Y2D1 282 aaPredicted RBP5.65□□□□□ -1.5
POLR2J4-204ENST00000418424 ZBTB12Q9Y330 459 aaPredicted RBP5.64□□□□□ -1.51
POLR2J4-204ENST00000418424 AKT1S1Q96B36 256 aa5.62□□□□□ -1.51
POLR2J4-204ENST00000418424 OSCARQ8IYS5 282 aa5.59□□□□□ -1.51
POLR2J4-204ENST00000418424 REM2Q8IYK8 340 aaPredicted RBP5.57□□□□□ -1.52
POLR2J4-204ENST00000418424 DNAJC5Q9H3Z4 198 aa5.55□□□□□ -1.52
POLR2J4-204ENST00000418424 PIP4P2Q8N4L2 257 aa5.54□□□□□ -1.52
POLR2J4-204ENST00000418424 SP7Q8TDD2 431 aaPredicted RBP5.54□□□□□ -1.52
POLR2J4-204ENST00000418424 HAX1O00165 279 aa5.52□□□□□ -1.53
POLR2J4-204ENST00000418424 PITPNM1O00562 1244 aa5.52□□□□□ -1.53
POLR2J4-204ENST00000418424 ZBTB22O15209 634 aa5.51□□□□□ -1.53
POLR2J4-204ENST00000418424 FBLN2P98095 1184 aa5.49□□□□□ -1.53
POLR2J4-204ENST00000418424 ATXN8OSP0DMR3 200 aa5.47□□□□□ -1.53
POLR2J4-204ENST00000418424 FXR2P51116 673 aaKnown RBP eCLIP5.47□□□□□ -1.53
POLR2J4-204ENST00000418424 SPDYE2BA6NHP3 402 aa5.44□□□□□ -1.54
POLR2J4-204ENST00000418424 SPDYE6P0CI01 402 aa5.44□□□□□ -1.54
POLR2J4-204ENST00000418424 SPDYE2Q495Y8 402 aa5.44□□□□□ -1.54
POLR2J4-204ENST00000418424 CLEC11AQ9Y240 323 aa5.44□□□□□ -1.54
POLR2J4-204ENST00000418424 SPDYE1Q8NFV5 336 aaPredicted RBP5.4□□□□□ -1.54
POLR2J4-204ENST00000418424 ZNF692Q9BU19 519 aaPredicted RBP5.4□□□□□ -1.54
POLR2J4-204ENST00000418424 PRKAR2AP13861 404 aaKnown RBP5.39□□□□□ -1.55
POLR2J4-204ENST00000418424 EVX2Q03828 476 aa5.38□□□□□ -1.55
POLR2J4-204ENST00000418424 MKRN4PQ13434 485 aaPredicted RBP5.37□□□□□ -1.55
POLR2J4-204ENST00000418424 SSUH2Q9Y2M2 353 aa5.33□□□□□ -1.56
POLR2J4-204ENST00000418424 CHADLQ6NUI6 762 aa5.32□□□□□ -1.56
POLR2J4-204ENST00000418424 PRR29P0C7W0 189 aa5.31□□□□□ -1.56
POLR2J4-204ENST00000418424 C19orf67A6NJJ6 358 aa5.3□□□□□ -1.56
POLR2J4-204ENST00000418424 PABPN1Q86U42 306 aaKnown RBP eCLIP5.3□□□□□ -1.56
POLR2J4-204ENST00000418424 GABBR2O75899 941 aa5.27□□□□□ -1.57
POLR2J4-204ENST00000418424 LHX8Q68G74 356 aa5.22□□□□□ -1.57
POLR2J4-204ENST00000418424 CD44P16070 742 aaKnown RBP5.21□□□□□ -1.58
POLR2J4-204ENST00000418424 FARP1Q9Y4F1 1045 aaPredicted RBP5.21□□□□□ -1.58
POLR2J4-204ENST00000418424 ILDR1Q86SU0 546 aaPredicted RBP5.18□□□□□ -1.58
POLR2J4-204ENST00000418424 CSRNP3Q8WYN3 585 aa5.17□□□□□ -1.58
POLR2J4-204ENST00000418424 DCBLD2Q96PD2 775 aa5.15□□□□□ -1.59
POLR2J4-204ENST00000418424 ZRANB1Q9UGI0 708 aa5.14□□□□□ -1.59
POLR2J4-204ENST00000418424 POTEIP0CG38 1075 aa5.13□□□□□ -1.59
POLR2J4-204ENST00000418424 CLCN6P51797 869 aa5.13□□□□□ -1.59
POLR2J4-204ENST00000418424 STAG3Q9UJ98 1225 aa5.13□□□□□ -1.59
POLR2J4-204ENST00000418424 EHMT2Q96KQ7 1210 aa5.12□□□□□ -1.59
POLR2J4-204ENST00000418424 CREBZFQ9NS37 354 aa5.11□□□□□ -1.59
POLR2J4-204ENST00000418424 SPDYE4A6NLX3 237 aa5.1□□□□□ -1.59
POLR2J4-204ENST00000418424 PAK3O75914 559 aaPredicted RBP5.09□□□□□ -1.59
POLR2J4-204ENST00000418424 ZNF579Q8NAF0 562 aaKnown RBP5.09□□□□□ -1.59
POLR2J4-204ENST00000418424 GALR2O43603 387 aaPredicted RBP5.06□□□□□ -1.6
POLR2J4-204ENST00000418424 NPM1P06748 294 aaKnown RBP eCLIP5.05□□□□□ -1.6
POLR2J4-204ENST00000418424 PHF12Q96QT6 1004 aa5.05□□□□□ -1.6
POLR2J4-204ENST00000418424 PLSCR2Q9NRY7 297 aa5.03□□□□□ -1.6
POLR2J4-204ENST00000418424 MNX1P50219 401 aaPredicted RBP4.98□□□□□ -1.61
POLR2J4-204ENST00000418424 OTUD5Q96G74 571 aa4.98□□□□□ -1.61
POLR2J4-204ENST00000418424 TSPYL2Q9H2G4 693 aaPredicted RBP4.97□□□□□ -1.61
POLR2J4-204ENST00000418424 POTEB2H3BUK9 544 aa4.96□□□□□ -1.62
POLR2J4-204ENST00000418424 PELP1Q8IZL8 1130 aaKnown RBP4.96□□□□□ -1.62
POLR2J4-204ENST00000418424 MS4A3Q96HJ5 214 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms