Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
CALR3Q96L12 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
CALR3Q96L12 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.49
CALR3Q96L12 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CALR3Q96L12 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CALR3Q96L12 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CALR3Q96L12 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CALR3Q96L12 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CALR3Q96L12 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CALR3Q96L12 RNU6-1179P-201ENST00000384667 107 ntBASIC5.71□□□□□ -1.5
CALR3Q96L12 Y_RNA.605-201ENST00000410577 105 ntBASIC5.71□□□□□ -1.5
CALR3Q96L12 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC5.71□□□□□ -1.5
CALR3Q96L12 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.71□□□□□ -1.5
CALR3Q96L12 ARL2BPP10-201ENST00000446487 531 ntBASIC5.71□□□□□ -1.5
CALR3Q96L12 AL445665.1-202ENST00000452436 324 ntBASIC5.71□□□□□ -1.5
CALR3Q96L12 RNU7-187P-201ENST00000458985 68 ntBASIC5.71□□□□□ -1.5
CALR3Q96L12 AC092754.1-201ENST00000472975 479 ntBASIC5.71□□□□□ -1.5
CALR3Q96L12 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.71□□□□□ -1.5
CALR3Q96L12 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.71□□□□□ -1.5
CALR3Q96L12 SRP72-202ENST00000504757 745 ntTSL 2 BASIC5.71□□□□□ -1.5
CALR3Q96L12 RNU6-699P-201ENST00000517081 110 ntBASIC5.71□□□□□ -1.5
CALR3Q96L12 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.71□□□□□ -1.5
CALR3Q96L12 AC091516.1-201ENST00000549191 703 ntBASIC5.71□□□□□ -1.5
CALR3Q96L12 AL352979.3-201ENST00000553515 247 ntBASIC5.71□□□□□ -1.5
CALR3Q96L12 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC5.71□□□□□ -1.5
CALR3Q96L12 OR1M4P-201ENST00000589199 287 ntBASIC5.71□□□□□ -1.5
CALR3Q96L12 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
CALR3Q96L12 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CALR3Q96L12 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CALR3Q96L12 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CALR3Q96L12 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CALR3Q96L12 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.71□□□□□ -1.5
CALR3Q96L12 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CALR3Q96L12 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.71□□□□□ -1.5
CALR3Q96L12 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CALR3Q96L12 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CALR3Q96L12 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CALR3Q96L12 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.7□□□□□ -1.5
CALR3Q96L12 AL031595.2-201ENST00000624215 19071 ntBASIC5.7□□□□□ -1.5
CALR3Q96L12 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.7□□□□□ -1.5
CALR3Q96L12 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CALR3Q96L12 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CALR3Q96L12 OR13C1P-202ENST00000641378 2919 ntBASIC5.7□□□□□ -1.5
CALR3Q96L12 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CALR3Q96L12 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CALR3Q96L12 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
CALR3Q96L12 RNU1-65P-201ENST00000363919 148 ntBASIC5.7□□□□□ -1.5
CALR3Q96L12 U3.15-201ENST00000365398 212 ntBASIC5.7□□□□□ -1.5
CALR3Q96L12 RNY1P14-201ENST00000384426 108 ntBASIC5.7□□□□□ -1.5
CALR3Q96L12 RNU6-331P-201ENST00000384724 107 ntBASIC5.7□□□□□ -1.5
CALR3Q96L12 AC092642.1-201ENST00000392417 425 ntBASIC5.7□□□□□ -1.5
CALR3Q96L12 HMGB1P20-201ENST00000402555 677 ntBASIC5.7□□□□□ -1.5
CALR3Q96L12 RPS15AP6-201ENST00000420703 385 ntBASIC5.7□□□□□ -1.5
CALR3Q96L12 EIF4EP1-201ENST00000422311 642 ntBASIC5.7□□□□□ -1.5
CALR3Q96L12 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.7□□□□□ -1.5
CALR3Q96L12 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.7□□□□□ -1.5
CALR3Q96L12 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.7□□□□□ -1.5
CALR3Q96L12 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.7□□□□□ -1.5
CALR3Q96L12 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.7□□□□□ -1.5
CALR3Q96L12 snoU13.24-201ENST00000458998 104 ntBASIC5.7□□□□□ -1.5
CALR3Q96L12 HMGB1P22-201ENST00000505315 124 ntBASIC5.7□□□□□ -1.5
CALR3Q96L12 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.7□□□□□ -1.5
CALR3Q96L12 RNU6-764P-201ENST00000516396 105 ntBASIC5.7□□□□□ -1.5
CALR3Q96L12 SCARNA16.2-201ENST00000516520 172 ntBASIC5.7□□□□□ -1.5
CALR3Q96L12 RNA5SP360-201ENST00000516555 118 ntBASIC5.7□□□□□ -1.5
CALR3Q96L12 RNA5SP384-201ENST00000516615 116 ntBASIC5.7□□□□□ -1.5
CALR3Q96L12 SCARNA16.4-201ENST00000516956 187 ntBASIC5.7□□□□□ -1.5
CALR3Q96L12 AC104576.1-201ENST00000524225 88 ntBASIC5.7□□□□□ -1.5
CALR3Q96L12 AC024940.3-201ENST00000538551 316 ntBASIC5.7□□□□□ -1.5
CALR3Q96L12 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.7□□□□□ -1.5
CALR3Q96L12 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.7□□□□□ -1.5
CALR3Q96L12 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.7□□□□□ -1.5
CALR3Q96L12 MRPS21P7-201ENST00000566937 238 ntBASIC5.7□□□□□ -1.5
CALR3Q96L12 MIR3921-201ENST00000577308 85 ntBASIC5.7□□□□□ -1.5
CALR3Q96L12 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.7□□□□□ -1.5
CALR3Q96L12 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
CALR3Q96L12 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CALR3Q96L12 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CALR3Q96L12 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CALR3Q96L12 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CALR3Q96L12 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CALR3Q96L12 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CALR3Q96L12 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CALR3Q96L12 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.69□□□□□ -1.5
CALR3Q96L12 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.69□□□□□ -1.5
CALR3Q96L12 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CALR3Q96L12 SRRM1P3-201ENST00000426911 2678 ntBASIC5.69□□□□□ -1.5
CALR3Q96L12 RN7SKP275-201ENST00000364626 301 ntBASIC5.69□□□□□ -1.5
CALR3Q96L12 MIR517A-201ENST00000385001 87 ntBASIC5.69□□□□□ -1.5
CALR3Q96L12 RNU2-3P-201ENST00000410144 191 ntBASIC5.69□□□□□ -1.5
CALR3Q96L12 CYCSP33-201ENST00000414485 327 ntBASIC5.69□□□□□ -1.5
CALR3Q96L12 AL133173.1-201ENST00000423458 397 ntBASIC5.69□□□□□ -1.5
CALR3Q96L12 UBE2D3P2-201ENST00000424409 445 ntBASIC5.69□□□□□ -1.5
CALR3Q96L12 AC008267.5-201ENST00000424928 265 ntBASIC5.69□□□□□ -1.5
CALR3Q96L12 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.69□□□□□ -1.5
CALR3Q96L12 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.69□□□□□ -1.5
CALR3Q96L12 GAPDHP58-201ENST00000438477 1006 ntBASIC5.69□□□□□ -1.5
CALR3Q96L12 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.69□□□□□ -1.5
CALR3Q96L12 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.69□□□□□ -1.5
CALR3Q96L12 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms