RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 AEBP2Q6ZN18 517 aaPredicted RBP17.64■□□□□ 0.41
SCARNA16.2-201ENST00000516520 CHIC1Q5VXU3 224 aa17■□□□□ 0.31
SCARNA16.2-201ENST00000516520 SENP3Q9H4L4 574 aaPredicted RBP15.13■□□□□ 0.01
SCARNA16.2-201ENST00000516520 PHF23Q9BUL5 403 aaPredicted RBP14.9□□□□□ -0.02
SCARNA16.2-201ENST00000516520 FOXD1Q16676 465 aa14.01□□□□□ -0.17
SCARNA16.2-201ENST00000516520 PLPPR3Q6T4P5 718 aa13.7□□□□□ -0.22
SCARNA16.2-201ENST00000516520 PPP6R1Q9UPN7 881 aa13.19□□□□□ -0.3
SCARNA16.2-201ENST00000516520 ADRA2BP18089 450 aa13.18□□□□□ -0.3
SCARNA16.2-201ENST00000516520 PIAS4Q8N2W9 510 aaPredicted RBP13.18□□□□□ -0.3
SCARNA16.2-201ENST00000516520 MSH5O43196 834 aa13.12□□□□□ -0.31
SCARNA16.2-201ENST00000516520 POTEDQ86YR6 584 aa12.43□□□□□ -0.42
SCARNA16.2-201ENST00000516520 SCAF1Q9H7N4 1312 aaKnown RBP12.17□□□□□ -0.46
SCARNA16.2-201ENST00000516520 MAPK8IP2Q13387 824 aaPredicted RBP12.02□□□□□ -0.49
SCARNA16.2-201ENST00000516520 PPP4R3CPQ6ZMV5 832 aa12□□□□□ -0.49
SCARNA16.2-201ENST00000516520 DMRT2Q9Y5R5 561 aa12□□□□□ -0.49
SCARNA16.2-201ENST00000516520 CNKSR2Q8WXI2 1034 aa11.76□□□□□ -0.53
SCARNA16.2-201ENST00000516520 NCBP3Q53F19 620 aaKnown RBP11.65□□□□□ -0.54
SCARNA16.2-201ENST00000516520 HOXD11P31277 338 aaPredicted RBP11.63□□□□□ -0.55
SCARNA16.2-201ENST00000516520 RNF216Q9NWF9 866 aaPredicted RBP11.6□□□□□ -0.55
SCARNA16.2-201ENST00000516520 DCAF8L1A6NGE4 600 aa11.49□□□□□ -0.57
SCARNA16.2-201ENST00000516520 NPM3O75607 178 aaKnown RBP11.41□□□□□ -0.58
SCARNA16.2-201ENST00000516520 KCNA4P22459 653 aa11.33□□□□□ -0.6
SCARNA16.2-201ENST00000516520 DNAJC5BQ9UF47 199 aa11.25□□□□□ -0.61
SCARNA16.2-201ENST00000516520 RNF39Q9H2S5 420 aa11.17□□□□□ -0.62
SCARNA16.2-201ENST00000516520 CACNB1Q02641 598 aaPredicted RBP11.12□□□□□ -0.63
SCARNA16.2-201ENST00000516520 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.09□□□□□ -0.63
SCARNA16.2-201ENST00000516520 C1QBPQ07021 282 aaKnown RBP11.05□□□□□ -0.64
SCARNA16.2-201ENST00000516520 U3KPZ7 1027 aaPredicted RBP10.84□□□□□ -0.67
SCARNA16.2-201ENST00000516520 SLC4A2P04920 1241 aa10.82□□□□□ -0.68
SCARNA16.2-201ENST00000516520 SLC4A1APQ9BWU0 796 aaKnown RBP10.78□□□□□ -0.68
SCARNA16.2-201ENST00000516520 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.7□□□□□ -0.7
SCARNA16.2-201ENST00000516520 HNRNPUL2Q1KMD3 747 aaKnown RBP10.7□□□□□ -0.7
SCARNA16.2-201ENST00000516520 APLP2Q06481 763 aa10.69□□□□□ -0.7
SCARNA16.2-201ENST00000516520 CAPN15O75808 1086 aa10.63□□□□□ -0.71
SCARNA16.2-201ENST00000516520 SAMD1Q6SPF0 538 aaPredicted RBP10.62□□□□□ -0.71
SCARNA16.2-201ENST00000516520 MYCNP04198 464 aaPredicted RBP10.61□□□□□ -0.71
SCARNA16.2-201ENST00000516520 SPINK5Q9NQ38 1064 aaPredicted RBP10.61□□□□□ -0.71
SCARNA16.2-201ENST00000516520 FOXD4L1Q9NU39 408 aa10.58□□□□□ -0.72
SCARNA16.2-201ENST00000516520 ZNF219Q9P2Y4 722 aaPredicted RBP10.54□□□□□ -0.72
SCARNA16.2-201ENST00000516520 DSG3P32926 999 aa10.51□□□□□ -0.73
SCARNA16.2-201ENST00000516520 TRHP20396 242 aaPredicted RBP10.49□□□□□ -0.73
SCARNA16.2-201ENST00000516520 ZBTB22O15209 634 aa10.39□□□□□ -0.75
SCARNA16.2-201ENST00000516520 ABCB7O75027 752 aa10.37□□□□□ -0.75
SCARNA16.2-201ENST00000516520 ATXN8OSP0DMR3 200 aa10.26□□□□□ -0.77
SCARNA16.2-201ENST00000516520 POLA2Q14181 598 aa10.24□□□□□ -0.77
SCARNA16.2-201ENST00000516520 ATF5Q9Y2D1 282 aaPredicted RBP10.24□□□□□ -0.77
SCARNA16.2-201ENST00000516520 ZBTB12Q9Y330 459 aaPredicted RBP10.15□□□□□ -0.78
SCARNA16.2-201ENST00000516520 RBM42Q9BTD8 480 aaKnown RBP10.11□□□□□ -0.79
SCARNA16.2-201ENST00000516520 CSRNP3Q8WYN3 585 aa10.09□□□□□ -0.79
SCARNA16.2-201ENST00000516520 EHMT2Q96KQ7 1210 aa10.07□□□□□ -0.8
SCARNA16.2-201ENST00000516520 FBLN2P98095 1184 aa9.95□□□□□ -0.82
SCARNA16.2-201ENST00000516520 OSCARQ8IYS5 282 aa9.91□□□□□ -0.82
SCARNA16.2-201ENST00000516520 AKT1S1Q96B36 256 aa9.88□□□□□ -0.83
SCARNA16.2-201ENST00000516520 SPDYE2BA6NHP3 402 aa9.81□□□□□ -0.84
SCARNA16.2-201ENST00000516520 SPDYE6P0CI01 402 aa9.81□□□□□ -0.84
SCARNA16.2-201ENST00000516520 SPDYE2Q495Y8 402 aa9.81□□□□□ -0.84
SCARNA16.2-201ENST00000516520 MKRN4PQ13434 485 aaPredicted RBP9.8□□□□□ -0.84
SCARNA16.2-201ENST00000516520 POTEHQ6S545 545 aa9.8□□□□□ -0.84
SCARNA16.2-201ENST00000516520 CHRDL2Q6WN34 429 aa9.75□□□□□ -0.85
SCARNA16.2-201ENST00000516520 REM2Q8IYK8 340 aaPredicted RBP9.74□□□□□ -0.85
SCARNA16.2-201ENST00000516520 ZNF692Q9BU19 519 aaPredicted RBP9.69□□□□□ -0.86
SCARNA16.2-201ENST00000516520 SSUH2Q9Y2M2 353 aa9.67□□□□□ -0.86
SCARNA16.2-201ENST00000516520 PITPNM1O00562 1244 aa9.63□□□□□ -0.87
SCARNA16.2-201ENST00000516520 SPDYE1Q8NFV5 336 aaPredicted RBP9.6□□□□□ -0.87
SCARNA16.2-201ENST00000516520 PABPN1Q86U42 306 aaKnown RBP eCLIP9.55□□□□□ -0.88
SCARNA16.2-201ENST00000516520 PIP4P2Q8N4L2 257 aa9.53□□□□□ -0.88
SCARNA16.2-201ENST00000516520 CLEC11AQ9Y240 323 aa9.53□□□□□ -0.88
SCARNA16.2-201ENST00000516520 FXR2P51116 673 aaKnown RBP eCLIP9.52□□□□□ -0.89
SCARNA16.2-201ENST00000516520 SPDYE4A6NLX3 237 aa9.48□□□□□ -0.89
SCARNA16.2-201ENST00000516520 PRR29P0C7W0 189 aa9.41□□□□□ -0.9
SCARNA16.2-201ENST00000516520 PRKAR2AP13861 404 aaKnown RBP9.4□□□□□ -0.9
SCARNA16.2-201ENST00000516520 STAG3Q9UJ98 1225 aa9.39□□□□□ -0.91
SCARNA16.2-201ENST00000516520 HAX1O00165 279 aa9.33□□□□□ -0.92
SCARNA16.2-201ENST00000516520 CHADLQ6NUI6 762 aa9.29□□□□□ -0.92
SCARNA16.2-201ENST00000516520 SP7Q8TDD2 431 aaPredicted RBP9.28□□□□□ -0.92
SCARNA16.2-201ENST00000516520 PROM2Q8N271 834 aa9.27□□□□□ -0.93
SCARNA16.2-201ENST00000516520 C19orf67A6NJJ6 358 aa9.22□□□□□ -0.93
SCARNA16.2-201ENST00000516520 FARP1Q9Y4F1 1045 aaPredicted RBP9.21□□□□□ -0.94
SCARNA16.2-201ENST00000516520 CREBZFQ9NS37 354 aa9.19□□□□□ -0.94
SCARNA16.2-201ENST00000516520 FKBP8Q14318 412 aa9.17□□□□□ -0.94
SCARNA16.2-201ENST00000516520 EVX2Q03828 476 aa9.15□□□□□ -0.94
SCARNA16.2-201ENST00000516520 CD44P16070 742 aaKnown RBP9.12□□□□□ -0.95
SCARNA16.2-201ENST00000516520 NPM1P06748 294 aaKnown RBP eCLIP9.1□□□□□ -0.95
SCARNA16.2-201ENST00000516520 PLEKHG5O94827 1062 aa9.08□□□□□ -0.96
SCARNA16.2-201ENST00000516520 PAK3O75914 559 aaPredicted RBP9.05□□□□□ -0.96
SCARNA16.2-201ENST00000516520 CLCN6P51797 869 aa9.05□□□□□ -0.96
SCARNA16.2-201ENST00000516520 MNX1P50219 401 aaPredicted RBP9.04□□□□□ -0.96
SCARNA16.2-201ENST00000516520 MIER1Q8N108 512 aa9.03□□□□□ -0.96
SCARNA16.2-201ENST00000516520 GABBR2O75899 941 aa9.02□□□□□ -0.97
SCARNA16.2-201ENST00000516520 ZRANB1Q9UGI0 708 aa9.01□□□□□ -0.97
SCARNA16.2-201ENST00000516520 ZNF579Q8NAF0 562 aaKnown RBP9□□□□□ -0.97
SCARNA16.2-201ENST00000516520 FBXO3Q9UK99 471 aa9□□□□□ -0.97
SCARNA16.2-201ENST00000516520 PLCD3Q8N3E9 789 aa8.99□□□□□ -0.97
SCARNA16.2-201ENST00000516520 ZBTB47Q9UFB7 747 aaPredicted RBP8.97□□□□□ -0.97
SCARNA16.2-201ENST00000516520 PHF12Q96QT6 1004 aa8.88□□□□□ -0.99
SCARNA16.2-201ENST00000516520 TSPYL2Q9H2G4 693 aaPredicted RBP8.88□□□□□ -0.99
SCARNA16.2-201ENST00000516520 DCBLD2Q96PD2 775 aa8.85□□□□□ -0.99
SCARNA16.2-201ENST00000516520 VASPP50552 380 aaPredicted RBP8.84□□□□□ -0.99
SCARNA16.2-201ENST00000516520 RASEFQ8IZ41 740 aa8.84□□□□□ -0.99
SCARNA16.2-201ENST00000516520 GALR2O43603 387 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms