Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 AC005332.7-201ENST00000614046 2005 ntBASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 KRASP1-201ENST00000407852 552 ntBASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 RN7SL471P-201ENST00000580476 299 ntBASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 AL023875.1-201ENST00000640777 796 ntBASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 TP73-202ENST00000354437 2140 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
HLA-DRB4X5D2U9 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 AC093484.2-201ENST00000580996 2166 ntBASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 AC133681.1-201ENST00000465482 601 ntBASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 F2R-202ENST00000505600 442 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 ZNF815P-204ENST00000434898 1737 ntBASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DRB4X5D2U9 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 AC124016.1-201ENST00000609552 612 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms