Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC9.95□□□□□ -0.82
LINC01558Q9Y6Z2 NARF-204ENST00000390006 1766 ntTSL 2 BASIC9.95□□□□□ -0.82
LINC01558Q9Y6Z2 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01558Q9Y6Z2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
LINC01558Q9Y6Z2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
LINC01558Q9Y6Z2 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC9.95□□□□□ -0.82
LINC01558Q9Y6Z2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC9.95□□□□□ -0.82
LINC01558Q9Y6Z2 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01558Q9Y6Z2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
LINC01558Q9Y6Z2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC9.95□□□□□ -0.82
LINC01558Q9Y6Z2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01558Q9Y6Z2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
LINC01558Q9Y6Z2 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC9.95□□□□□ -0.82
LINC01558Q9Y6Z2 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC9.95□□□□□ -0.82
LINC01558Q9Y6Z2 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01558Q9Y6Z2 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01558Q9Y6Z2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01558Q9Y6Z2 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01558Q9Y6Z2 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01558Q9Y6Z2 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
LINC01558Q9Y6Z2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01558Q9Y6Z2 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
LINC01558Q9Y6Z2 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01558Q9Y6Z2 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01558Q9Y6Z2 AC063926.3-201ENST00000624734 5658 ntBASIC9.95□□□□□ -0.82
LINC01558Q9Y6Z2 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC01558Q9Y6Z2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 CROCCP2-202ENST00000412962 2773 ntBASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 UBALD1-205ENST00000590891 2641 ntBASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 AL512353.2-201ENST00000448759 1962 ntBASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 PXK-206ENST00000463280 2825 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 BANP-201ENST00000286122 2368 ntTSL 5 BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 TSPY26P-202ENST00000565928 3884 ntBASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC01558Q9Y6Z2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC9.93□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms