Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB11Q9Y5F2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB11Q9Y5F2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PCDHB11Q9Y5F2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
PCDHB11Q9Y5F2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB11Q9Y5F2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB11Q9Y5F2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHB11Q9Y5F2 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB11Q9Y5F2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHB11Q9Y5F2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PCDHB11Q9Y5F2 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
PCDHB11Q9Y5F2 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHB11Q9Y5F2 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.75■□□□□ 0.59
PCDHB11Q9Y5F2 KRT18P57-201ENST00000443599 1254 ntBASIC18.75■□□□□ 0.59
PCDHB11Q9Y5F2 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHB11Q9Y5F2 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.75■□□□□ 0.59
PCDHB11Q9Y5F2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.75■□□□□ 0.59
PCDHB11Q9Y5F2 AC026271.3-201ENST00000571884 352 ntBASIC18.75■□□□□ 0.59
PCDHB11Q9Y5F2 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHB11Q9Y5F2 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB11Q9Y5F2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB11Q9Y5F2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PCDHB11Q9Y5F2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB11Q9Y5F2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHB11Q9Y5F2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHB11Q9Y5F2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB11Q9Y5F2 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PCDHB11Q9Y5F2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHB11Q9Y5F2 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB11Q9Y5F2 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHB11Q9Y5F2 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
PCDHB11Q9Y5F2 AL390955.1-201ENST00000428694 934 ntBASIC18.74■□□□□ 0.59
PCDHB11Q9Y5F2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHB11Q9Y5F2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.74■□□□□ 0.59
PCDHB11Q9Y5F2 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
PCDHB11Q9Y5F2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHB11Q9Y5F2 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHB11Q9Y5F2 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.74■□□□□ 0.59
PCDHB11Q9Y5F2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHB11Q9Y5F2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB11Q9Y5F2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB11Q9Y5F2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB11Q9Y5F2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB11Q9Y5F2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB11Q9Y5F2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PCDHB11Q9Y5F2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
PCDHB11Q9Y5F2 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB11Q9Y5F2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PCDHB11Q9Y5F2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHB11Q9Y5F2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB11Q9Y5F2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB11Q9Y5F2 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.73■□□□□ 0.59
PCDHB11Q9Y5F2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHB11Q9Y5F2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB11Q9Y5F2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB11Q9Y5F2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB11Q9Y5F2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB11Q9Y5F2 FSCN1P1-201ENST00000568912 1481 ntBASIC18.73■□□□□ 0.59
PCDHB11Q9Y5F2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB11Q9Y5F2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB11Q9Y5F2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PCDHB11Q9Y5F2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHB11Q9Y5F2 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB11Q9Y5F2 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHB11Q9Y5F2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB11Q9Y5F2 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDHB11Q9Y5F2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHB11Q9Y5F2 ATP5G1P1-201ENST00000448724 379 ntBASIC18.73■□□□□ 0.59
PCDHB11Q9Y5F2 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDHB11Q9Y5F2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDHB11Q9Y5F2 AL445675.2-201ENST00000620291 557 ntBASIC18.73■□□□□ 0.59
PCDHB11Q9Y5F2 HLA-A-209ENST00000638375 975 ntBASIC18.73■□□□□ 0.59
PCDHB11Q9Y5F2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB11Q9Y5F2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB11Q9Y5F2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB11Q9Y5F2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB11Q9Y5F2 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB11Q9Y5F2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHB11Q9Y5F2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB11Q9Y5F2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB11Q9Y5F2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
PCDHB11Q9Y5F2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB11Q9Y5F2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHB11Q9Y5F2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHB11Q9Y5F2 TERF1P1-201ENST00000311003 1181 ntBASIC18.72■□□□□ 0.59
PCDHB11Q9Y5F2 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB11Q9Y5F2 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms