Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC22.01■■□□□ 1.11
DDX41Q9UJV9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
DDX41Q9UJV9 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC22.01■■□□□ 1.11
DDX41Q9UJV9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC22.01■■□□□ 1.11
DDX41Q9UJV9 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC22.01■■□□□ 1.11
DDX41Q9UJV9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC22.01■■□□□ 1.11
DDX41Q9UJV9 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX41Q9UJV9 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX41Q9UJV9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
DDX41Q9UJV9 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX41Q9UJV9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
DDX41Q9UJV9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC22.01■■□□□ 1.11
DDX41Q9UJV9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX41Q9UJV9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC22■■□□□ 1.11
DDX41Q9UJV9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DDX41Q9UJV9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DDX41Q9UJV9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC22■■□□□ 1.11
DDX41Q9UJV9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC22■■□□□ 1.11
DDX41Q9UJV9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
DDX41Q9UJV9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC22■■□□□ 1.11
DDX41Q9UJV9 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC22■■□□□ 1.11
DDX41Q9UJV9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DDX41Q9UJV9 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC22■■□□□ 1.11
DDX41Q9UJV9 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC22■■□□□ 1.11
DDX41Q9UJV9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DDX41Q9UJV9 AC113347.1-201ENST00000413321 391 ntBASIC22■■□□□ 1.11
DDX41Q9UJV9 AC008040.2-201ENST00000461049 708 ntBASIC22■■□□□ 1.11
DDX41Q9UJV9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC22■■□□□ 1.11
DDX41Q9UJV9 AC097488.1-201ENST00000507834 756 ntBASIC22■■□□□ 1.11
DDX41Q9UJV9 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC22■■□□□ 1.11
DDX41Q9UJV9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC22■■□□□ 1.11
DDX41Q9UJV9 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DDX41Q9UJV9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
DDX41Q9UJV9 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC22■■□□□ 1.11
DDX41Q9UJV9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC22■■□□□ 1.11
DDX41Q9UJV9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC22■■□□□ 1.11
DDX41Q9UJV9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DDX41Q9UJV9 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DDX41Q9UJV9 RCC2P6-201ENST00000526625 1557 ntBASIC21.99■■□□□ 1.11
DDX41Q9UJV9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
DDX41Q9UJV9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX41Q9UJV9 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.99■■□□□ 1.11
DDX41Q9UJV9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX41Q9UJV9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX41Q9UJV9 KRT8P8-201ENST00000434750 1448 ntBASIC21.99■■□□□ 1.11
DDX41Q9UJV9 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX41Q9UJV9 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX41Q9UJV9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX41Q9UJV9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX41Q9UJV9 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX41Q9UJV9 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX41Q9UJV9 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX41Q9UJV9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
DDX41Q9UJV9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.99■■□□□ 1.11
DDX41Q9UJV9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
DDX41Q9UJV9 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX41Q9UJV9 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.99■■□□□ 1.11
DDX41Q9UJV9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
DDX41Q9UJV9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX41Q9UJV9 AL512408.1-201ENST00000569378 2000 ntBASIC21.99■■□□□ 1.11
DDX41Q9UJV9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
DDX41Q9UJV9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX41Q9UJV9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
DDX41Q9UJV9 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
DDX41Q9UJV9 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
DDX41Q9UJV9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
DDX41Q9UJV9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
DDX41Q9UJV9 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX41Q9UJV9 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.98■■□□□ 1.11
DDX41Q9UJV9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX41Q9UJV9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX41Q9UJV9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
DDX41Q9UJV9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX41Q9UJV9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX41Q9UJV9 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX41Q9UJV9 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
DDX41Q9UJV9 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX41Q9UJV9 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX41Q9UJV9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX41Q9UJV9 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.98■■□□□ 1.11
DDX41Q9UJV9 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.98■■□□□ 1.11
DDX41Q9UJV9 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.98■■□□□ 1.11
DDX41Q9UJV9 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.98■■□□□ 1.11
DDX41Q9UJV9 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.98■■□□□ 1.11
DDX41Q9UJV9 AP000692.2-201ENST00000608391 879 ntBASIC21.98■■□□□ 1.11
DDX41Q9UJV9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.98■■□□□ 1.11
DDX41Q9UJV9 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.98■■□□□ 1.11
DDX41Q9UJV9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
DDX41Q9UJV9 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.98■■□□□ 1.11
DDX41Q9UJV9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX41Q9UJV9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX41Q9UJV9 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX41Q9UJV9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.97■■□□□ 1.11
DDX41Q9UJV9 AC073508.3-201ENST00000619697 1419 ntBASIC21.97■■□□□ 1.11
DDX41Q9UJV9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
DDX41Q9UJV9 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX41Q9UJV9 CRYGFP-201ENST00000418459 633 ntBASIC21.97■■□□□ 1.11
DDX41Q9UJV9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.97■■□□□ 1.11
DDX41Q9UJV9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
DDX41Q9UJV9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms