Protein–RNA interactions for Protein: Q9UJK0

TSR3, Ribosome biogenesis protein TSR3 homolog, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3Q9UJK0 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
TSR3Q9UJK0 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
TSR3Q9UJK0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TSR3Q9UJK0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TSR3Q9UJK0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TSR3Q9UJK0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TSR3Q9UJK0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TSR3Q9UJK0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TSR3Q9UJK0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.01■□□□□ 0.63
TSR3Q9UJK0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
TSR3Q9UJK0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TSR3Q9UJK0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.01■□□□□ 0.63
TSR3Q9UJK0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TSR3Q9UJK0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
TSR3Q9UJK0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TSR3Q9UJK0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TSR3Q9UJK0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TSR3Q9UJK0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TSR3Q9UJK0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TSR3Q9UJK0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TSR3Q9UJK0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TSR3Q9UJK0 AC104417.2-201ENST00000562989 1793 ntBASIC19.01■□□□□ 0.63
TSR3Q9UJK0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TSR3Q9UJK0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TSR3Q9UJK0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TSR3Q9UJK0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19■□□□□ 0.63
TSR3Q9UJK0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
TSR3Q9UJK0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TSR3Q9UJK0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TSR3Q9UJK0 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
TSR3Q9UJK0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19■□□□□ 0.63
TSR3Q9UJK0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
TSR3Q9UJK0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TSR3Q9UJK0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TSR3Q9UJK0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TSR3Q9UJK0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19■□□□□ 0.63
TSR3Q9UJK0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19■□□□□ 0.63
TSR3Q9UJK0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TSR3Q9UJK0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TSR3Q9UJK0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TSR3Q9UJK0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19■□□□□ 0.63
TSR3Q9UJK0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19■□□□□ 0.63
TSR3Q9UJK0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19■□□□□ 0.63
TSR3Q9UJK0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19■□□□□ 0.63
TSR3Q9UJK0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19■□□□□ 0.63
TSR3Q9UJK0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19■□□□□ 0.63
TSR3Q9UJK0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19■□□□□ 0.63
TSR3Q9UJK0 AC098590.1-201ENST00000468126 897 ntBASIC19■□□□□ 0.63
TSR3Q9UJK0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19■□□□□ 0.63
TSR3Q9UJK0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19■□□□□ 0.63
TSR3Q9UJK0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19■□□□□ 0.63
TSR3Q9UJK0 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19■□□□□ 0.63
TSR3Q9UJK0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TSR3Q9UJK0 AC110285.5-201ENST00000611501 352 ntBASIC19■□□□□ 0.63
TSR3Q9UJK0 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC19■□□□□ 0.63
TSR3Q9UJK0 AL359736.2-201ENST00000621992 437 ntBASIC19■□□□□ 0.63
TSR3Q9UJK0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19■□□□□ 0.63
TSR3Q9UJK0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19■□□□□ 0.63
TSR3Q9UJK0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19■□□□□ 0.63
TSR3Q9UJK0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
TSR3Q9UJK0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19■□□□□ 0.63
TSR3Q9UJK0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19■□□□□ 0.63
TSR3Q9UJK0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19■□□□□ 0.63
TSR3Q9UJK0 ANKRD18DP-204ENST00000455355 1975 ntBASIC19■□□□□ 0.63
TSR3Q9UJK0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TSR3Q9UJK0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
TSR3Q9UJK0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19■□□□□ 0.63
TSR3Q9UJK0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TSR3Q9UJK0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TSR3Q9UJK0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TSR3Q9UJK0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19■□□□□ 0.63
TSR3Q9UJK0 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TSR3Q9UJK0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19■□□□□ 0.63
TSR3Q9UJK0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19■□□□□ 0.63
TSR3Q9UJK0 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.99■□□□□ 0.63
TSR3Q9UJK0 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TSR3Q9UJK0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TSR3Q9UJK0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TSR3Q9UJK0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TSR3Q9UJK0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TSR3Q9UJK0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.99■□□□□ 0.63
TSR3Q9UJK0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
TSR3Q9UJK0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TSR3Q9UJK0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TSR3Q9UJK0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TSR3Q9UJK0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TSR3Q9UJK0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TSR3Q9UJK0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.99■□□□□ 0.63
TSR3Q9UJK0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TSR3Q9UJK0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.99■□□□□ 0.63
TSR3Q9UJK0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.99■□□□□ 0.63
TSR3Q9UJK0 C1QL1P1-201ENST00000568105 661 ntBASIC18.99■□□□□ 0.63
TSR3Q9UJK0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.99■□□□□ 0.63
TSR3Q9UJK0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.99■□□□□ 0.63
TSR3Q9UJK0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TSR3Q9UJK0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
TSR3Q9UJK0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TSR3Q9UJK0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
TSR3Q9UJK0 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TSR3Q9UJK0 AL049812.1-201ENST00000432563 2267 ntBASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms