Protein–RNA interactions for Protein: Q9UH90

FBXO40, F-box only protein 40, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO40Q9UH90 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.78■■□□□ 1.08
FBXO40Q9UH90 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.78■■□□□ 1.08
FBXO40Q9UH90 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.78■■□□□ 1.08
FBXO40Q9UH90 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
FBXO40Q9UH90 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FBXO40Q9UH90 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.78■■□□□ 1.08
FBXO40Q9UH90 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
FBXO40Q9UH90 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
FBXO40Q9UH90 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
FBXO40Q9UH90 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FBXO40Q9UH90 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FBXO40Q9UH90 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.77■■□□□ 1.08
FBXO40Q9UH90 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
FBXO40Q9UH90 IER3-202ENST00000376377 1350 ntBASIC21.77■■□□□ 1.08
FBXO40Q9UH90 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FBXO40Q9UH90 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.77■■□□□ 1.08
FBXO40Q9UH90 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.77■■□□□ 1.08
FBXO40Q9UH90 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.77■■□□□ 1.08
FBXO40Q9UH90 STARP1-201ENST00000397973 869 ntBASIC21.77■■□□□ 1.08
FBXO40Q9UH90 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
FBXO40Q9UH90 KRT18P38-201ENST00000449496 1282 ntBASIC21.77■■□□□ 1.08
FBXO40Q9UH90 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
FBXO40Q9UH90 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
FBXO40Q9UH90 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.77■■□□□ 1.08
FBXO40Q9UH90 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FBXO40Q9UH90 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
FBXO40Q9UH90 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
FBXO40Q9UH90 SDHAP1-207ENST00000440850 2000 ntBASIC21.77■■□□□ 1.07
FBXO40Q9UH90 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
FBXO40Q9UH90 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
FBXO40Q9UH90 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.76■■□□□ 1.07
FBXO40Q9UH90 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.76■■□□□ 1.07
FBXO40Q9UH90 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
FBXO40Q9UH90 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.76■■□□□ 1.07
FBXO40Q9UH90 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FBXO40Q9UH90 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.76■■□□□ 1.07
FBXO40Q9UH90 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.76■■□□□ 1.07
FBXO40Q9UH90 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
FBXO40Q9UH90 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
FBXO40Q9UH90 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
FBXO40Q9UH90 GCSHP2-201ENST00000560971 527 ntBASIC21.76■■□□□ 1.07
FBXO40Q9UH90 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
FBXO40Q9UH90 CR769767.2-201ENST00000622735 460 ntBASIC21.76■■□□□ 1.07
FBXO40Q9UH90 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.76■■□□□ 1.07
FBXO40Q9UH90 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FBXO40Q9UH90 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.76■■□□□ 1.07
FBXO40Q9UH90 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
FBXO40Q9UH90 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.76■■□□□ 1.07
FBXO40Q9UH90 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
FBXO40Q9UH90 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
FBXO40Q9UH90 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FBXO40Q9UH90 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FBXO40Q9UH90 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.75■■□□□ 1.07
FBXO40Q9UH90 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.75■■□□□ 1.07
FBXO40Q9UH90 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
FBXO40Q9UH90 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.75■■□□□ 1.07
FBXO40Q9UH90 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FBXO40Q9UH90 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.75■■□□□ 1.07
FBXO40Q9UH90 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.75■■□□□ 1.07
FBXO40Q9UH90 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.75■■□□□ 1.07
FBXO40Q9UH90 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FBXO40Q9UH90 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.75■■□□□ 1.07
FBXO40Q9UH90 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FBXO40Q9UH90 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FBXO40Q9UH90 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FBXO40Q9UH90 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.75■■□□□ 1.07
FBXO40Q9UH90 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.75■■□□□ 1.07
FBXO40Q9UH90 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.75■■□□□ 1.07
FBXO40Q9UH90 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
FBXO40Q9UH90 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.74■■□□□ 1.07
FBXO40Q9UH90 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.74■■□□□ 1.07
FBXO40Q9UH90 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.74■■□□□ 1.07
FBXO40Q9UH90 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FBXO40Q9UH90 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
FBXO40Q9UH90 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.74■■□□□ 1.07
FBXO40Q9UH90 AC112907.2-201ENST00000448639 330 ntBASIC21.74■■□□□ 1.07
FBXO40Q9UH90 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
FBXO40Q9UH90 AL136038.3-201ENST00000561909 1096 ntBASIC21.74■■□□□ 1.07
FBXO40Q9UH90 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.74■■□□□ 1.07
FBXO40Q9UH90 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
FBXO40Q9UH90 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.74■■□□□ 1.07
FBXO40Q9UH90 AC005332.1-201ENST00000577698 1310 ntBASIC21.74■■□□□ 1.07
FBXO40Q9UH90 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FBXO40Q9UH90 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
FBXO40Q9UH90 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.74■■□□□ 1.07
FBXO40Q9UH90 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.74■■□□□ 1.07
FBXO40Q9UH90 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FBXO40Q9UH90 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
FBXO40Q9UH90 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
FBXO40Q9UH90 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
FBXO40Q9UH90 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FBXO40Q9UH90 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.73■■□□□ 1.07
FBXO40Q9UH90 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.73■■□□□ 1.07
FBXO40Q9UH90 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.73■■□□□ 1.07
FBXO40Q9UH90 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.73■■□□□ 1.07
FBXO40Q9UH90 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.73■■□□□ 1.07
FBXO40Q9UH90 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.73■■□□□ 1.07
FBXO40Q9UH90 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.73■■□□□ 1.07
FBXO40Q9UH90 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
FBXO40Q9UH90 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms