Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
DUX4Q9UBX2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.79■□□□□ 0.28
DUX4Q9UBX2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
DUX4Q9UBX2 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
DUX4Q9UBX2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
DUX4Q9UBX2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DUX4Q9UBX2 PTBP1P-201ENST00000554374 1601 ntBASIC16.79■□□□□ 0.28
DUX4Q9UBX2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
DUX4Q9UBX2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DUX4Q9UBX2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
DUX4Q9UBX2 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
DUX4Q9UBX2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.79■□□□□ 0.28
DUX4Q9UBX2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.79■□□□□ 0.28
DUX4Q9UBX2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.79■□□□□ 0.28
DUX4Q9UBX2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
DUX4Q9UBX2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.79■□□□□ 0.28
DUX4Q9UBX2 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DUX4Q9UBX2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DUX4Q9UBX2 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
DUX4Q9UBX2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DUX4Q9UBX2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
DUX4Q9UBX2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.79■□□□□ 0.28
DUX4Q9UBX2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DUX4Q9UBX2 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
DUX4Q9UBX2 AL158211.5-201ENST00000623583 2518 ntBASIC16.78■□□□□ 0.28
DUX4Q9UBX2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DUX4Q9UBX2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
DUX4Q9UBX2 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DUX4Q9UBX2 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DUX4Q9UBX2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
DUX4Q9UBX2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DUX4Q9UBX2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DUX4Q9UBX2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.78■□□□□ 0.28
DUX4Q9UBX2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DUX4Q9UBX2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DUX4Q9UBX2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DUX4Q9UBX2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.78■□□□□ 0.28
DUX4Q9UBX2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.78■□□□□ 0.28
DUX4Q9UBX2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
DUX4Q9UBX2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DUX4Q9UBX2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.78■□□□□ 0.28
DUX4Q9UBX2 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DUX4Q9UBX2 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.78■□□□□ 0.28
DUX4Q9UBX2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.78■□□□□ 0.28
DUX4Q9UBX2 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
DUX4Q9UBX2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.78■□□□□ 0.28
DUX4Q9UBX2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DUX4Q9UBX2 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.78■□□□□ 0.28
DUX4Q9UBX2 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
DUX4Q9UBX2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DUX4Q9UBX2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
DUX4Q9UBX2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DUX4Q9UBX2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
DUX4Q9UBX2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DUX4Q9UBX2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DUX4Q9UBX2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.77■□□□□ 0.28
DUX4Q9UBX2 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
DUX4Q9UBX2 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.77■□□□□ 0.28
DUX4Q9UBX2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DUX4Q9UBX2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
DUX4Q9UBX2 TCF3P1-201ENST00000423021 1937 ntBASIC16.77■□□□□ 0.28
DUX4Q9UBX2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DUX4Q9UBX2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DUX4Q9UBX2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
DUX4Q9UBX2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.77■□□□□ 0.28
DUX4Q9UBX2 RNA5SP413-201ENST00000516373 109 ntBASIC16.77■□□□□ 0.28
DUX4Q9UBX2 KRT18P6-201ENST00000555540 1265 ntBASIC16.77■□□□□ 0.28
DUX4Q9UBX2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.77■□□□□ 0.28
DUX4Q9UBX2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.77■□□□□ 0.28
DUX4Q9UBX2 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.77■□□□□ 0.28
DUX4Q9UBX2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
DUX4Q9UBX2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DUX4Q9UBX2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
DUX4Q9UBX2 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
DUX4Q9UBX2 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
DUX4Q9UBX2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.77■□□□□ 0.27
DUX4Q9UBX2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.77■□□□□ 0.27
DUX4Q9UBX2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.77■□□□□ 0.27
DUX4Q9UBX2 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
DUX4Q9UBX2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
DUX4Q9UBX2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
DUX4Q9UBX2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms