Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 HLA-G-202ENST00000376815 851 ntBASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 HLA-G-203ENST00000376818 1127 ntBASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COMMD3Q9UBI1 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
COMMD3Q9UBI1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COMMD3Q9UBI1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COMMD3Q9UBI1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COMMD3Q9UBI1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.84■□□□□ 0.29
COMMD3Q9UBI1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
COMMD3Q9UBI1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COMMD3Q9UBI1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COMMD3Q9UBI1 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COMMD3Q9UBI1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COMMD3Q9UBI1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.84■□□□□ 0.29
COMMD3Q9UBI1 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
COMMD3Q9UBI1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
COMMD3Q9UBI1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.84■□□□□ 0.29
COMMD3Q9UBI1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.84■□□□□ 0.29
COMMD3Q9UBI1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.84■□□□□ 0.29
COMMD3Q9UBI1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.84■□□□□ 0.29
COMMD3Q9UBI1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COMMD3Q9UBI1 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COMMD3Q9UBI1 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COMMD3Q9UBI1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COMMD3Q9UBI1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
COMMD3Q9UBI1 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COMMD3Q9UBI1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
COMMD3Q9UBI1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.84■□□□□ 0.29
COMMD3Q9UBI1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COMMD3Q9UBI1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
COMMD3Q9UBI1 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.84■□□□□ 0.29
COMMD3Q9UBI1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.83■□□□□ 0.29
COMMD3Q9UBI1 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.83■□□□□ 0.29
COMMD3Q9UBI1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
COMMD3Q9UBI1 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
COMMD3Q9UBI1 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
COMMD3Q9UBI1 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COMMD3Q9UBI1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COMMD3Q9UBI1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COMMD3Q9UBI1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COMMD3Q9UBI1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
COMMD3Q9UBI1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
COMMD3Q9UBI1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COMMD3Q9UBI1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.83■□□□□ 0.28
COMMD3Q9UBI1 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
COMMD3Q9UBI1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COMMD3Q9UBI1 RASA4CP-201ENST00000424092 1398 ntBASIC16.83■□□□□ 0.28
COMMD3Q9UBI1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
COMMD3Q9UBI1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.83■□□□□ 0.28
COMMD3Q9UBI1 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
COMMD3Q9UBI1 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
COMMD3Q9UBI1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COMMD3Q9UBI1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
COMMD3Q9UBI1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COMMD3Q9UBI1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COMMD3Q9UBI1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 MKRN4P-201ENST00000444706 1521 ntBASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD3Q9UBI1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms