Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC52A3Q9NQ40 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SLC52A3Q9NQ40 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC52A3Q9NQ40 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC52A3Q9NQ40 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC52A3Q9NQ40 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC52A3Q9NQ40 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC52A3Q9NQ40 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC52A3Q9NQ40 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SLC52A3Q9NQ40 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
SLC52A3Q9NQ40 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.14■□□□□ 0.5
SLC52A3Q9NQ40 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.14■□□□□ 0.5
SLC52A3Q9NQ40 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.14■□□□□ 0.5
SLC52A3Q9NQ40 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.14■□□□□ 0.5
SLC52A3Q9NQ40 AC073592.3-201ENST00000625118 1834 ntBASIC18.14■□□□□ 0.5
SLC52A3Q9NQ40 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC52A3Q9NQ40 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC52A3Q9NQ40 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC52A3Q9NQ40 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC52A3Q9NQ40 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC52A3Q9NQ40 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.14■□□□□ 0.49
SLC52A3Q9NQ40 AC083906.2-201ENST00000511578 360 ntBASIC18.14■□□□□ 0.49
SLC52A3Q9NQ40 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC52A3Q9NQ40 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.14■□□□□ 0.49
SLC52A3Q9NQ40 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.14■□□□□ 0.49
SLC52A3Q9NQ40 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.14■□□□□ 0.49
SLC52A3Q9NQ40 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.14■□□□□ 0.49
SLC52A3Q9NQ40 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC52A3Q9NQ40 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SLC52A3Q9NQ40 AL121829.2-201ENST00000620908 328 ntBASIC18.14■□□□□ 0.49
SLC52A3Q9NQ40 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC52A3Q9NQ40 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC52A3Q9NQ40 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC52A3Q9NQ40 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC52A3Q9NQ40 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC52A3Q9NQ40 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC52A3Q9NQ40 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC52A3Q9NQ40 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC52A3Q9NQ40 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC52A3Q9NQ40 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC52A3Q9NQ40 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SLC52A3Q9NQ40 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.13■□□□□ 0.49
SLC52A3Q9NQ40 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC52A3Q9NQ40 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC52A3Q9NQ40 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.13■□□□□ 0.49
SLC52A3Q9NQ40 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC52A3Q9NQ40 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC52A3Q9NQ40 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.13■□□□□ 0.49
SLC52A3Q9NQ40 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SLC52A3Q9NQ40 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC52A3Q9NQ40 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SLC52A3Q9NQ40 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.13■□□□□ 0.49
SLC52A3Q9NQ40 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC52A3Q9NQ40 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
SLC52A3Q9NQ40 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
SLC52A3Q9NQ40 AC120498.9-201ENST00000339021 3867 ntBASIC18.13■□□□□ 0.49
SLC52A3Q9NQ40 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC52A3Q9NQ40 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC52A3Q9NQ40 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC52A3Q9NQ40 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC52A3Q9NQ40 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC52A3Q9NQ40 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC52A3Q9NQ40 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC52A3Q9NQ40 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC52A3Q9NQ40 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC52A3Q9NQ40 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.13■□□□□ 0.49
SLC52A3Q9NQ40 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC52A3Q9NQ40 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC52A3Q9NQ40 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC52A3Q9NQ40 AC092368.3-202ENST00000574180 1591 ntBASIC18.13■□□□□ 0.49
SLC52A3Q9NQ40 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC52A3Q9NQ40 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.12■□□□□ 0.49
SLC52A3Q9NQ40 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC52A3Q9NQ40 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC52A3Q9NQ40 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC52A3Q9NQ40 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC52A3Q9NQ40 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.12■□□□□ 0.49
SLC52A3Q9NQ40 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC52A3Q9NQ40 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC52A3Q9NQ40 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SLC52A3Q9NQ40 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SLC52A3Q9NQ40 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.12■□□□□ 0.49
SLC52A3Q9NQ40 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.12■□□□□ 0.49
SLC52A3Q9NQ40 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SLC52A3Q9NQ40 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC52A3Q9NQ40 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
SLC52A3Q9NQ40 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.12■□□□□ 0.49
SLC52A3Q9NQ40 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC52A3Q9NQ40 ABALON-201ENST00000629058 1903 ntBASIC18.11■□□□□ 0.49
SLC52A3Q9NQ40 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC52A3Q9NQ40 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SLC52A3Q9NQ40 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC52A3Q9NQ40 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.11■□□□□ 0.49
SLC52A3Q9NQ40 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.11■□□□□ 0.49
SLC52A3Q9NQ40 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC52A3Q9NQ40 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC52A3Q9NQ40 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC52A3Q9NQ40 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC52A3Q9NQ40 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SLC52A3Q9NQ40 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms