Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC12.83□□□□□ -0.36
SND1-IT1Q9HBX3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC12.83□□□□□ -0.36
SND1-IT1Q9HBX3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SND1-IT1Q9HBX3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SND1-IT1Q9HBX3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SND1-IT1Q9HBX3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC12.83□□□□□ -0.36
SND1-IT1Q9HBX3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SND1-IT1Q9HBX3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SND1-IT1Q9HBX3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC12.83□□□□□ -0.36
SND1-IT1Q9HBX3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC12.83□□□□□ -0.36
SND1-IT1Q9HBX3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC12.83□□□□□ -0.36
SND1-IT1Q9HBX3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SND1-IT1Q9HBX3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
SND1-IT1Q9HBX3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SND1-IT1Q9HBX3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC12.83□□□□□ -0.36
SND1-IT1Q9HBX3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SND1-IT1Q9HBX3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SND1-IT1Q9HBX3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC12.83□□□□□ -0.36
SND1-IT1Q9HBX3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
SND1-IT1Q9HBX3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SND1-IT1Q9HBX3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SND1-IT1Q9HBX3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SND1-IT1Q9HBX3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SND1-IT1Q9HBX3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 GAS2L1P2-201ENST00000436355 1356 ntBASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 PHGDH-210ENST00000641115 1638 ntBASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SND1-IT1Q9HBX3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 Z98044.1-201ENST00000632503 1764 ntBASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 AL162412.1-201ENST00000567129 965 ntBASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 AC005837.3-201ENST00000612163 286 ntBASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 SP2-202ENST00000613139 908 ntTSL 5 BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 AC010536.3-201ENST00000620306 533 ntBASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 NOC2LP2-201ENST00000407594 1944 ntBASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms