Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRTM1Q9HBL6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRTM1Q9HBL6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.41■□□□□ 0.54
LRTM1Q9HBL6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.41■□□□□ 0.54
LRTM1Q9HBL6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRTM1Q9HBL6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
LRTM1Q9HBL6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.41■□□□□ 0.54
LRTM1Q9HBL6 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRTM1Q9HBL6 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRTM1Q9HBL6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRTM1Q9HBL6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.41■□□□□ 0.54
LRTM1Q9HBL6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRTM1Q9HBL6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRTM1Q9HBL6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.41■□□□□ 0.54
LRTM1Q9HBL6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
LRTM1Q9HBL6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRTM1Q9HBL6 PRKY-204ENST00000533551 1019 ntBASIC18.41■□□□□ 0.54
LRTM1Q9HBL6 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
LRTM1Q9HBL6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRTM1Q9HBL6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRTM1Q9HBL6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.41■□□□□ 0.54
LRTM1Q9HBL6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
LRTM1Q9HBL6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRTM1Q9HBL6 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LRTM1Q9HBL6 FEM1AP3-201ENST00000403722 1741 ntBASIC18.4■□□□□ 0.54
LRTM1Q9HBL6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRTM1Q9HBL6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.4■□□□□ 0.54
LRTM1Q9HBL6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.4■□□□□ 0.54
LRTM1Q9HBL6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LRTM1Q9HBL6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRTM1Q9HBL6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.4■□□□□ 0.54
LRTM1Q9HBL6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRTM1Q9HBL6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRTM1Q9HBL6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRTM1Q9HBL6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRTM1Q9HBL6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.4■□□□□ 0.54
LRTM1Q9HBL6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.4■□□□□ 0.54
LRTM1Q9HBL6 UNC93B5-201ENST00000530315 699 ntBASIC18.4■□□□□ 0.54
LRTM1Q9HBL6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRTM1Q9HBL6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRTM1Q9HBL6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRTM1Q9HBL6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LRTM1Q9HBL6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.4■□□□□ 0.54
LRTM1Q9HBL6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRTM1Q9HBL6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRTM1Q9HBL6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRTM1Q9HBL6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRTM1Q9HBL6 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
LRTM1Q9HBL6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRTM1Q9HBL6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.4■□□□□ 0.54
LRTM1Q9HBL6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.4■□□□□ 0.54
LRTM1Q9HBL6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.4■□□□□ 0.54
LRTM1Q9HBL6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRTM1Q9HBL6 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRTM1Q9HBL6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
LRTM1Q9HBL6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRTM1Q9HBL6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRTM1Q9HBL6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.39■□□□□ 0.53
LRTM1Q9HBL6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.39■□□□□ 0.53
LRTM1Q9HBL6 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.39■□□□□ 0.53
LRTM1Q9HBL6 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.39■□□□□ 0.53
LRTM1Q9HBL6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRTM1Q9HBL6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
LRTM1Q9HBL6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.39■□□□□ 0.53
LRTM1Q9HBL6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.39■□□□□ 0.53
LRTM1Q9HBL6 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.39■□□□□ 0.53
LRTM1Q9HBL6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRTM1Q9HBL6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.39■□□□□ 0.53
LRTM1Q9HBL6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRTM1Q9HBL6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRTM1Q9HBL6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.39■□□□□ 0.53
LRTM1Q9HBL6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
LRTM1Q9HBL6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRTM1Q9HBL6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.39■□□□□ 0.53
LRTM1Q9HBL6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRTM1Q9HBL6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRTM1Q9HBL6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRTM1Q9HBL6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRTM1Q9HBL6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRTM1Q9HBL6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRTM1Q9HBL6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LRTM1Q9HBL6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
LRTM1Q9HBL6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRTM1Q9HBL6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRTM1Q9HBL6 AL355802.2-201ENST00000402069 882 ntBASIC18.38■□□□□ 0.53
LRTM1Q9HBL6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.38■□□□□ 0.53
LRTM1Q9HBL6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.38■□□□□ 0.53
LRTM1Q9HBL6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRTM1Q9HBL6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.38■□□□□ 0.53
LRTM1Q9HBL6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.38■□□□□ 0.53
LRTM1Q9HBL6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms