Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LHX5Q9H2C1 AP000974.1-201ENST00000623909 2387 ntBASIC20.22■□□□□ 0.83
LHX5Q9H2C1 KRT8P11-201ENST00000409686 1436 ntBASIC20.22■□□□□ 0.83
LHX5Q9H2C1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.22■□□□□ 0.83
LHX5Q9H2C1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LHX5Q9H2C1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LHX5Q9H2C1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LHX5Q9H2C1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.22■□□□□ 0.83
LHX5Q9H2C1 MESTP1-201ENST00000404287 994 ntBASIC20.22■□□□□ 0.83
LHX5Q9H2C1 TSPY7P-201ENST00000431358 1114 ntBASIC20.22■□□□□ 0.83
LHX5Q9H2C1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
LHX5Q9H2C1 AC008040.2-201ENST00000461049 708 ntBASIC20.22■□□□□ 0.83
LHX5Q9H2C1 B3GAT3P1-201ENST00000471720 806 ntBASIC20.22■□□□□ 0.83
LHX5Q9H2C1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
LHX5Q9H2C1 AC116562.2-201ENST00000507042 360 ntBASIC20.22■□□□□ 0.83
LHX5Q9H2C1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.22■□□□□ 0.83
LHX5Q9H2C1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
LHX5Q9H2C1 MIR6786-201ENST00000616843 113 ntBASIC20.22■□□□□ 0.83
LHX5Q9H2C1 AC073912.3-201ENST00000624414 853 ntBASIC20.22■□□□□ 0.83
LHX5Q9H2C1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LHX5Q9H2C1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.22■□□□□ 0.83
LHX5Q9H2C1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LHX5Q9H2C1 FSCN1P1-201ENST00000568912 1481 ntBASIC20.22■□□□□ 0.83
LHX5Q9H2C1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LHX5Q9H2C1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LHX5Q9H2C1 AL049812.1-201ENST00000432563 2267 ntBASIC20.22■□□□□ 0.83
LHX5Q9H2C1 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LHX5Q9H2C1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LHX5Q9H2C1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
LHX5Q9H2C1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LHX5Q9H2C1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LHX5Q9H2C1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LHX5Q9H2C1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.21■□□□□ 0.83
LHX5Q9H2C1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LHX5Q9H2C1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
LHX5Q9H2C1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
LHX5Q9H2C1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LHX5Q9H2C1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LHX5Q9H2C1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LHX5Q9H2C1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LHX5Q9H2C1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.21■□□□□ 0.83
LHX5Q9H2C1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.21■□□□□ 0.83
LHX5Q9H2C1 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.21■□□□□ 0.83
LHX5Q9H2C1 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LHX5Q9H2C1 PRSS44-201ENST00000515154 1146 ntBASIC20.21■□□□□ 0.83
LHX5Q9H2C1 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.21■□□□□ 0.83
LHX5Q9H2C1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.21■□□□□ 0.83
LHX5Q9H2C1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
LHX5Q9H2C1 AC011298.2-201ENST00000617989 482 ntBASIC20.21■□□□□ 0.83
LHX5Q9H2C1 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LHX5Q9H2C1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.21■□□□□ 0.83
LHX5Q9H2C1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LHX5Q9H2C1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.21■□□□□ 0.83
LHX5Q9H2C1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LHX5Q9H2C1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LHX5Q9H2C1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LHX5Q9H2C1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
LHX5Q9H2C1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LHX5Q9H2C1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
LHX5Q9H2C1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LHX5Q9H2C1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.2■□□□□ 0.82
LHX5Q9H2C1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LHX5Q9H2C1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
LHX5Q9H2C1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LHX5Q9H2C1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LHX5Q9H2C1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.2■□□□□ 0.82
LHX5Q9H2C1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.2■□□□□ 0.82
LHX5Q9H2C1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LHX5Q9H2C1 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
LHX5Q9H2C1 NUDT16P1-203ENST00000513809 620 ntBASIC20.2■□□□□ 0.82
LHX5Q9H2C1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.2■□□□□ 0.82
LHX5Q9H2C1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.2■□□□□ 0.82
LHX5Q9H2C1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.2■□□□□ 0.82
LHX5Q9H2C1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LHX5Q9H2C1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LHX5Q9H2C1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LHX5Q9H2C1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LHX5Q9H2C1 KRT17P2-201ENST00000300992 1314 ntBASIC20.2■□□□□ 0.82
LHX5Q9H2C1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LHX5Q9H2C1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
LHX5Q9H2C1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LHX5Q9H2C1 AC098818.2-201ENST00000564925 2320 ntBASIC20.2■□□□□ 0.82
LHX5Q9H2C1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
LHX5Q9H2C1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.2■□□□□ 0.82
LHX5Q9H2C1 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.2■□□□□ 0.82
LHX5Q9H2C1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LHX5Q9H2C1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LHX5Q9H2C1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.19■□□□□ 0.82
LHX5Q9H2C1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LHX5Q9H2C1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LHX5Q9H2C1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LHX5Q9H2C1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LHX5Q9H2C1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
LHX5Q9H2C1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
LHX5Q9H2C1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LHX5Q9H2C1 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LHX5Q9H2C1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LHX5Q9H2C1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LHX5Q9H2C1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
LHX5Q9H2C1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms