Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM2Q9C040 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM2Q9C040 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM2Q9C040 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM2Q9C040 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM2Q9C040 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM2Q9C040 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRIM2Q9C040 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM2Q9C040 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
TRIM2Q9C040 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TRIM2Q9C040 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM2Q9C040 BCL2-203ENST00000589955 5011 ntBASIC17.61■□□□□ 0.41
TRIM2Q9C040 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM2Q9C040 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM2Q9C040 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM2Q9C040 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM2Q9C040 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM2Q9C040 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM2Q9C040 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM2Q9C040 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.61■□□□□ 0.41
TRIM2Q9C040 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.61■□□□□ 0.41
TRIM2Q9C040 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TRIM2Q9C040 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TRIM2Q9C040 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM2Q9C040 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM2Q9C040 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM2Q9C040 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TRIM2Q9C040 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM2Q9C040 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM2Q9C040 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
TRIM2Q9C040 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM2Q9C040 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.61■□□□□ 0.41
TRIM2Q9C040 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM2Q9C040 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM2Q9C040 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM2Q9C040 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRIM2Q9C040 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM2Q9C040 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM2Q9C040 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM2Q9C040 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM2Q9C040 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM2Q9C040 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM2Q9C040 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM2Q9C040 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.6■□□□□ 0.41
TRIM2Q9C040 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM2Q9C040 AC142381.4-202ENST00000563973 229 ntBASIC17.6■□□□□ 0.41
TRIM2Q9C040 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM2Q9C040 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.6■□□□□ 0.41
TRIM2Q9C040 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM2Q9C040 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM2Q9C040 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM2Q9C040 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM2Q9C040 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.6■□□□□ 0.41
TRIM2Q9C040 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
TRIM2Q9C040 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM2Q9C040 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM2Q9C040 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM2Q9C040 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM2Q9C040 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM2Q9C040 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM2Q9C040 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM2Q9C040 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM2Q9C040 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM2Q9C040 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM2Q9C040 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM2Q9C040 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM2Q9C040 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TRIM2Q9C040 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM2Q9C040 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM2Q9C040 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM2Q9C040 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TRIM2Q9C040 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TRIM2Q9C040 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM2Q9C040 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
TRIM2Q9C040 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM2Q9C040 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM2Q9C040 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.59■□□□□ 0.41
TRIM2Q9C040 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM2Q9C040 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM2Q9C040 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM2Q9C040 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM2Q9C040 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM2Q9C040 AL158047.1-201ENST00000445918 881 ntBASIC17.59■□□□□ 0.41
TRIM2Q9C040 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM2Q9C040 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TRIM2Q9C040 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM2Q9C040 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM2Q9C040 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TRIM2Q9C040 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM2Q9C040 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM2Q9C040 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM2Q9C040 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
TRIM2Q9C040 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM2Q9C040 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TRIM2Q9C040 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TRIM2Q9C040 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM2Q9C040 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TRIM2Q9C040 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM2Q9C040 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM2Q9C040 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms