Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 AK4P3-201ENST00000418260 669 ntBASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 LIN28AP1-201ENST00000429574 405 ntBASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 ATP5G1P1-201ENST00000448724 379 ntBASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 KRT18P38-201ENST00000449496 1282 ntBASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 CKBP1-201ENST00000565489 1086 ntBASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 DGCR10-201ENST00000609839 495 ntBASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 AL023803.3-201ENST00000615559 522 ntBASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 AL138966.2-201ENST00000621997 464 ntBASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 AC011558.1-201ENST00000623459 338 ntBASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC6.51□□□□□ -1.37
KRTAP4-3Q9BYR4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 TSPY23P-201ENST00000440136 739 ntBASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 AL359075.1-203ENST00000462729 1002 ntBASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 YBX1P2-201ENST00000489612 999 ntBASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 NME3-204ENST00000563498 920 ntTSL 2 BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 AL441883.1-201ENST00000566170 1045 ntBASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 AC087388.1-201ENST00000571370 1112 ntBASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
KRTAP4-3Q9BYR4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms