Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.15■□□□□ 0.66
CPNE1Q99829 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.15■□□□□ 0.66
CPNE1Q99829 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.15■□□□□ 0.66
CPNE1Q99829 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE1Q99829 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CPNE1Q99829 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE1Q99829 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE1Q99829 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE1Q99829 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.15■□□□□ 0.66
CPNE1Q99829 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE1Q99829 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE1Q99829 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE1Q99829 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE1Q99829 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE1Q99829 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE1Q99829 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE1Q99829 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CPNE1Q99829 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE1Q99829 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.15■□□□□ 0.66
CPNE1Q99829 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CPNE1Q99829 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CPNE1Q99829 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CPNE1Q99829 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
CPNE1Q99829 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CPNE1Q99829 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE1Q99829 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.14■□□□□ 0.65
CPNE1Q99829 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE1Q99829 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE1Q99829 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE1Q99829 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE1Q99829 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.14■□□□□ 0.65
CPNE1Q99829 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.14■□□□□ 0.65
CPNE1Q99829 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CPNE1Q99829 AL109923.1-201ENST00000618799 583 ntBASIC19.14■□□□□ 0.65
CPNE1Q99829 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE1Q99829 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE1Q99829 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.14■□□□□ 0.65
CPNE1Q99829 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE1Q99829 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE1Q99829 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.14■□□□□ 0.65
CPNE1Q99829 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE1Q99829 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE1Q99829 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
CPNE1Q99829 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CPNE1Q99829 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE1Q99829 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE1Q99829 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE1Q99829 WIZP1-201ENST00000531444 2299 ntBASIC19.13■□□□□ 0.65
CPNE1Q99829 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.13■□□□□ 0.65
CPNE1Q99829 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE1Q99829 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CPNE1Q99829 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE1Q99829 UNC93B4-201ENST00000505679 747 ntBASIC19.13■□□□□ 0.65
CPNE1Q99829 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.13■□□□□ 0.65
CPNE1Q99829 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE1Q99829 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE1Q99829 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE1Q99829 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CPNE1Q99829 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE1Q99829 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE1Q99829 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.13■□□□□ 0.65
CPNE1Q99829 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE1Q99829 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CPNE1Q99829 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE1Q99829 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.13■□□□□ 0.65
CPNE1Q99829 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE1Q99829 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE1Q99829 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CPNE1Q99829 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE1Q99829 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CPNE1Q99829 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
CPNE1Q99829 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE1Q99829 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE1Q99829 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE1Q99829 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE1Q99829 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE1Q99829 AC009113.1-201ENST00000570267 2443 ntBASIC19.12■□□□□ 0.65
CPNE1Q99829 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE1Q99829 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
CPNE1Q99829 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.12■□□□□ 0.65
CPNE1Q99829 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE1Q99829 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE1Q99829 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CPNE1Q99829 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE1Q99829 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.12■□□□□ 0.65
CPNE1Q99829 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CPNE1Q99829 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.12■□□□□ 0.65
CPNE1Q99829 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE1Q99829 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.12■□□□□ 0.65
CPNE1Q99829 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.12■□□□□ 0.65
CPNE1Q99829 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
CPNE1Q99829 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE1Q99829 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE1Q99829 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE1Q99829 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE1Q99829 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE1Q99829 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE1Q99829 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE1Q99829 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE1Q99829 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms