Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPAS2Q99743 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NPAS2Q99743 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NPAS2Q99743 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPAS2Q99743 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NPAS2Q99743 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NPAS2Q99743 TEX21P-204ENST00000641479 1693 ntBASIC18.72■□□□□ 0.59
NPAS2Q99743 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.72■□□□□ 0.59
NPAS2Q99743 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPAS2Q99743 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.72■□□□□ 0.59
NPAS2Q99743 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NPAS2Q99743 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
NPAS2Q99743 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS2Q99743 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.71■□□□□ 0.59
NPAS2Q99743 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS2Q99743 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.71■□□□□ 0.59
NPAS2Q99743 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.71■□□□□ 0.59
NPAS2Q99743 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS2Q99743 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS2Q99743 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.71■□□□□ 0.59
NPAS2Q99743 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS2Q99743 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS2Q99743 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS2Q99743 HLA-G-202ENST00000376815 851 ntBASIC18.71■□□□□ 0.59
NPAS2Q99743 HLA-G-203ENST00000376818 1127 ntBASIC18.71■□□□□ 0.59
NPAS2Q99743 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.71■□□□□ 0.59
NPAS2Q99743 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
NPAS2Q99743 AC142381.4-202ENST00000563973 229 ntBASIC18.71■□□□□ 0.59
NPAS2Q99743 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.71■□□□□ 0.59
NPAS2Q99743 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.71■□□□□ 0.59
NPAS2Q99743 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.71■□□□□ 0.59
NPAS2Q99743 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.71■□□□□ 0.59
NPAS2Q99743 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS2Q99743 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.71■□□□□ 0.59
NPAS2Q99743 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS2Q99743 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS2Q99743 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS2Q99743 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS2Q99743 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS2Q99743 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS2Q99743 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS2Q99743 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS2Q99743 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.71■□□□□ 0.59
NPAS2Q99743 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
NPAS2Q99743 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
NPAS2Q99743 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
NPAS2Q99743 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS2Q99743 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS2Q99743 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS2Q99743 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS2Q99743 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS2Q99743 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.7■□□□□ 0.58
NPAS2Q99743 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS2Q99743 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS2Q99743 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS2Q99743 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.7■□□□□ 0.58
NPAS2Q99743 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.7■□□□□ 0.58
NPAS2Q99743 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS2Q99743 AL158047.1-201ENST00000445918 881 ntBASIC18.7■□□□□ 0.58
NPAS2Q99743 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.7■□□□□ 0.58
NPAS2Q99743 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS2Q99743 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS2Q99743 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.7■□□□□ 0.58
NPAS2Q99743 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.7■□□□□ 0.58
NPAS2Q99743 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NPAS2Q99743 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.7■□□□□ 0.58
NPAS2Q99743 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS2Q99743 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.7■□□□□ 0.58
NPAS2Q99743 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.7■□□□□ 0.58
NPAS2Q99743 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS2Q99743 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS2Q99743 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS2Q99743 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS2Q99743 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS2Q99743 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS2Q99743 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NPAS2Q99743 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS2Q99743 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NPAS2Q99743 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS2Q99743 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS2Q99743 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS2Q99743 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS2Q99743 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS2Q99743 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS2Q99743 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS2Q99743 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.69■□□□□ 0.58
NPAS2Q99743 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS2Q99743 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS2Q99743 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS2Q99743 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS2Q99743 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS2Q99743 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS2Q99743 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS2Q99743 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
NPAS2Q99743 AC093827.2-201ENST00000512654 315 ntBASIC18.69■□□□□ 0.58
NPAS2Q99743 AC005829.2-201ENST00000571422 1056 ntBASIC18.69■□□□□ 0.58
NPAS2Q99743 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
NPAS2Q99743 AC006557.6-201ENST00000623071 864 ntBASIC18.69■□□□□ 0.58
NPAS2Q99743 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.69■□□□□ 0.58
NPAS2Q99743 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms