Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LITAFQ99732 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC12.76□□□□□ -0.37
LITAFQ99732 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC12.76□□□□□ -0.37
LITAFQ99732 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
LITAFQ99732 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LITAFQ99732 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LITAFQ99732 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LITAFQ99732 GNE-204ENST00000539208 2190 ntTSL 2 BASIC12.76□□□□□ -0.37
LITAFQ99732 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LITAFQ99732 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LITAFQ99732 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LITAFQ99732 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
LITAFQ99732 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LITAFQ99732 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LITAFQ99732 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LITAFQ99732 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LITAFQ99732 IRS3P-201ENST00000223076 1006 ntBASIC12.75□□□□□ -0.37
LITAFQ99732 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC12.75□□□□□ -0.37
LITAFQ99732 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
LITAFQ99732 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LITAFQ99732 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LITAFQ99732 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC12.75□□□□□ -0.37
LITAFQ99732 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC12.75□□□□□ -0.37
LITAFQ99732 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC12.75□□□□□ -0.37
LITAFQ99732 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LITAFQ99732 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC12.75□□□□□ -0.37
LITAFQ99732 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
LITAFQ99732 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LITAFQ99732 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LITAFQ99732 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
LITAFQ99732 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LITAFQ99732 FEM1AP3-201ENST00000403722 1741 ntBASIC12.75□□□□□ -0.37
LITAFQ99732 SLC25A6P5-201ENST00000435663 894 ntBASIC12.75□□□□□ -0.37
LITAFQ99732 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC12.75□□□□□ -0.37
LITAFQ99732 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LITAFQ99732 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC12.75□□□□□ -0.37
LITAFQ99732 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC12.75□□□□□ -0.37
LITAFQ99732 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LITAFQ99732 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LITAFQ99732 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
LITAFQ99732 AC024257.2-201ENST00000549699 147 ntBASIC12.75□□□□□ -0.37
LITAFQ99732 AC027682.1-201ENST00000562846 899 ntBASIC12.75□□□□□ -0.37
LITAFQ99732 AC104417.2-201ENST00000562989 1793 ntBASIC12.75□□□□□ -0.37
LITAFQ99732 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC12.75□□□□□ -0.37
LITAFQ99732 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC12.75□□□□□ -0.37
LITAFQ99732 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC12.75□□□□□ -0.37
LITAFQ99732 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
LITAFQ99732 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
LITAFQ99732 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC12.75□□□□□ -0.37
LITAFQ99732 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC12.75□□□□□ -0.37
LITAFQ99732 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC12.75□□□□□ -0.37
LITAFQ99732 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC12.75□□□□□ -0.37
LITAFQ99732 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LITAFQ99732 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LITAFQ99732 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LITAFQ99732 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC12.75□□□□□ -0.37
LITAFQ99732 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
LITAFQ99732 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC12.75□□□□□ -0.37
LITAFQ99732 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LITAFQ99732 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
LITAFQ99732 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
LITAFQ99732 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LITAFQ99732 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LITAFQ99732 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LITAFQ99732 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC12.74□□□□□ -0.37
LITAFQ99732 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LITAFQ99732 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LITAFQ99732 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC12.74□□□□□ -0.37
LITAFQ99732 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
LITAFQ99732 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LITAFQ99732 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC12.74□□□□□ -0.37
LITAFQ99732 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC12.74□□□□□ -0.37
LITAFQ99732 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LITAFQ99732 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LITAFQ99732 AC018553.1-201ENST00000616682 1458 ntBASIC12.74□□□□□ -0.37
LITAFQ99732 UNC93B3-201ENST00000308076 687 ntBASIC12.74□□□□□ -0.37
LITAFQ99732 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LITAFQ99732 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC12.74□□□□□ -0.37
LITAFQ99732 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LITAFQ99732 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC12.74□□□□□ -0.37
LITAFQ99732 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC12.74□□□□□ -0.37
LITAFQ99732 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC12.74□□□□□ -0.37
LITAFQ99732 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC12.74□□□□□ -0.37
LITAFQ99732 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC12.74□□□□□ -0.37
LITAFQ99732 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC12.74□□□□□ -0.37
LITAFQ99732 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LITAFQ99732 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LITAFQ99732 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
LITAFQ99732 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LITAFQ99732 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC12.74□□□□□ -0.37
LITAFQ99732 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LITAFQ99732 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LITAFQ99732 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC12.74□□□□□ -0.37
LITAFQ99732 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC12.74□□□□□ -0.37
LITAFQ99732 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LITAFQ99732 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LITAFQ99732 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC12.74□□□□□ -0.37
LITAFQ99732 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC12.74□□□□□ -0.37
LITAFQ99732 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LITAFQ99732 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms