Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM5Q96HC4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM5Q96HC4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PDLIM5Q96HC4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDLIM5Q96HC4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.73■□□□□ 0.59
PDLIM5Q96HC4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PDLIM5Q96HC4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM5Q96HC4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PDLIM5Q96HC4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM5Q96HC4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PDLIM5Q96HC4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM5Q96HC4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM5Q96HC4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.72■□□□□ 0.59
PDLIM5Q96HC4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM5Q96HC4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM5Q96HC4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM5Q96HC4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM5Q96HC4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PDLIM5Q96HC4 FAM201B-201ENST00000458407 597 ntBASIC18.72■□□□□ 0.59
PDLIM5Q96HC4 AP002982.1-201ENST00000492365 877 ntBASIC18.72■□□□□ 0.59
PDLIM5Q96HC4 RARRES2P10-201ENST00000564312 460 ntBASIC18.72■□□□□ 0.59
PDLIM5Q96HC4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM5Q96HC4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM5Q96HC4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM5Q96HC4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
PDLIM5Q96HC4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM5Q96HC4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM5Q96HC4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM5Q96HC4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM5Q96HC4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDLIM5Q96HC4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.72■□□□□ 0.59
PDLIM5Q96HC4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.71■□□□□ 0.59
PDLIM5Q96HC4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM5Q96HC4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM5Q96HC4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.71■□□□□ 0.59
PDLIM5Q96HC4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM5Q96HC4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM5Q96HC4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM5Q96HC4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM5Q96HC4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM5Q96HC4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.71■□□□□ 0.59
PDLIM5Q96HC4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM5Q96HC4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM5Q96HC4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
PDLIM5Q96HC4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM5Q96HC4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.71■□□□□ 0.59
PDLIM5Q96HC4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.71■□□□□ 0.59
PDLIM5Q96HC4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM5Q96HC4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.71■□□□□ 0.59
PDLIM5Q96HC4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
PDLIM5Q96HC4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PDLIM5Q96HC4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM5Q96HC4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDLIM5Q96HC4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
PDLIM5Q96HC4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM5Q96HC4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM5Q96HC4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PDLIM5Q96HC4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM5Q96HC4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM5Q96HC4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM5Q96HC4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM5Q96HC4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
PDLIM5Q96HC4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM5Q96HC4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM5Q96HC4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM5Q96HC4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM5Q96HC4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM5Q96HC4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
PDLIM5Q96HC4 RPS2P4-201ENST00000476944 856 ntBASIC18.7■□□□□ 0.58
PDLIM5Q96HC4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.7■□□□□ 0.58
PDLIM5Q96HC4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.7■□□□□ 0.58
PDLIM5Q96HC4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.7■□□□□ 0.58
PDLIM5Q96HC4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.7■□□□□ 0.58
PDLIM5Q96HC4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM5Q96HC4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.7■□□□□ 0.58
PDLIM5Q96HC4 AL031598.1-201ENST00000561511 1773 ntBASIC18.7■□□□□ 0.58
PDLIM5Q96HC4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PDLIM5Q96HC4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDLIM5Q96HC4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.7■□□□□ 0.58
PDLIM5Q96HC4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM5Q96HC4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM5Q96HC4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.69■□□□□ 0.58
PDLIM5Q96HC4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
PDLIM5Q96HC4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM5Q96HC4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM5Q96HC4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
PDLIM5Q96HC4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.69■□□□□ 0.58
PDLIM5Q96HC4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PDLIM5Q96HC4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.69■□□□□ 0.58
PDLIM5Q96HC4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.69■□□□□ 0.58
PDLIM5Q96HC4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
PDLIM5Q96HC4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PDLIM5Q96HC4 AL359736.2-201ENST00000621992 437 ntBASIC18.69■□□□□ 0.58
PDLIM5Q96HC4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM5Q96HC4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM5Q96HC4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM5Q96HC4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PDLIM5Q96HC4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.69■□□□□ 0.58
PDLIM5Q96HC4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM5Q96HC4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms