Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIPA1Q96FS4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIPA1Q96FS4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.18■□□□□ 0.66
SIPA1Q96FS4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SIPA1Q96FS4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIPA1Q96FS4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SIPA1Q96FS4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIPA1Q96FS4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.18■□□□□ 0.66
SIPA1Q96FS4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SIPA1Q96FS4 TCF3P1-201ENST00000423021 1937 ntBASIC19.18■□□□□ 0.66
SIPA1Q96FS4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SIPA1Q96FS4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
SIPA1Q96FS4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SIPA1Q96FS4 AC009947.2-201ENST00000444014 672 ntBASIC19.18■□□□□ 0.66
SIPA1Q96FS4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.18■□□□□ 0.66
SIPA1Q96FS4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.18■□□□□ 0.66
SIPA1Q96FS4 AC008622.2-201ENST00000617006 1229 ntBASIC19.18■□□□□ 0.66
SIPA1Q96FS4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.18■□□□□ 0.66
SIPA1Q96FS4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIPA1Q96FS4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIPA1Q96FS4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.18■□□□□ 0.66
SIPA1Q96FS4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIPA1Q96FS4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIPA1Q96FS4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIPA1Q96FS4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.18■□□□□ 0.66
SIPA1Q96FS4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIPA1Q96FS4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIPA1Q96FS4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIPA1Q96FS4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.18■□□□□ 0.66
SIPA1Q96FS4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIPA1Q96FS4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIPA1Q96FS4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.18■□□□□ 0.66
SIPA1Q96FS4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
SIPA1Q96FS4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIPA1Q96FS4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
SIPA1Q96FS4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIPA1Q96FS4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SIPA1Q96FS4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
SIPA1Q96FS4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.17■□□□□ 0.66
SIPA1Q96FS4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIPA1Q96FS4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SIPA1Q96FS4 PCED1CP-201ENST00000419887 785 ntBASIC19.17■□□□□ 0.66
SIPA1Q96FS4 FAM86EP-206ENST00000510506 987 ntBASIC19.17■□□□□ 0.66
SIPA1Q96FS4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SIPA1Q96FS4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.17■□□□□ 0.66
SIPA1Q96FS4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
SIPA1Q96FS4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.17■□□□□ 0.66
SIPA1Q96FS4 NEK4P2-201ENST00000580004 1012 ntBASIC19.17■□□□□ 0.66
SIPA1Q96FS4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIPA1Q96FS4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIPA1Q96FS4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.17■□□□□ 0.66
SIPA1Q96FS4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SIPA1Q96FS4 LINC01006-201ENST00000333319 2292 ntBASIC19.17■□□□□ 0.66
SIPA1Q96FS4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIPA1Q96FS4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SIPA1Q96FS4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIPA1Q96FS4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIPA1Q96FS4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIPA1Q96FS4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SIPA1Q96FS4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.16■□□□□ 0.66
SIPA1Q96FS4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIPA1Q96FS4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIPA1Q96FS4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.16■□□□□ 0.66
SIPA1Q96FS4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SIPA1Q96FS4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.16■□□□□ 0.66
SIPA1Q96FS4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.16■□□□□ 0.66
SIPA1Q96FS4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIPA1Q96FS4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SIPA1Q96FS4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIPA1Q96FS4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIPA1Q96FS4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SIPA1Q96FS4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SIPA1Q96FS4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SIPA1Q96FS4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SIPA1Q96FS4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SIPA1Q96FS4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIPA1Q96FS4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIPA1Q96FS4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SIPA1Q96FS4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIPA1Q96FS4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SIPA1Q96FS4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SIPA1Q96FS4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIPA1Q96FS4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.15■□□□□ 0.66
SIPA1Q96FS4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.15■□□□□ 0.66
SIPA1Q96FS4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIPA1Q96FS4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms