Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE2Q96FN4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE2Q96FN4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE2Q96FN4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CPNE2Q96FN4 DUSP5P2-201ENST00000426873 1033 ntBASIC16.63■□□□□ 0.25
CPNE2Q96FN4 AC006970.2-201ENST00000450065 779 ntBASIC16.63■□□□□ 0.25
CPNE2Q96FN4 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.63■□□□□ 0.25
CPNE2Q96FN4 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.63■□□□□ 0.25
CPNE2Q96FN4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.63■□□□□ 0.25
CPNE2Q96FN4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.63■□□□□ 0.25
CPNE2Q96FN4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CPNE2Q96FN4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE2Q96FN4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE2Q96FN4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE2Q96FN4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.63■□□□□ 0.25
CPNE2Q96FN4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
CPNE2Q96FN4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.63■□□□□ 0.25
CPNE2Q96FN4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CPNE2Q96FN4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CPNE2Q96FN4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CPNE2Q96FN4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CPNE2Q96FN4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE2Q96FN4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE2Q96FN4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE2Q96FN4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.63■□□□□ 0.25
CPNE2Q96FN4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.63■□□□□ 0.25
CPNE2Q96FN4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 MIPEPP3-201ENST00000412105 444 ntBASIC16.62■□□□□ 0.25
CPNE2Q96FN4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.62■□□□□ 0.25
CPNE2Q96FN4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.61■□□□□ 0.25
CPNE2Q96FN4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 CDCA4P2-201ENST00000441182 718 ntBASIC16.61■□□□□ 0.25
CPNE2Q96FN4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 MIR4758-201ENST00000577688 71 ntBASIC16.61■□□□□ 0.25
CPNE2Q96FN4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 KRT8P8-201ENST00000434750 1448 ntBASIC16.61■□□□□ 0.25
CPNE2Q96FN4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CPNE2Q96FN4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE2Q96FN4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CPNE2Q96FN4 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.6■□□□□ 0.25
CPNE2Q96FN4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE2Q96FN4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPNE2Q96FN4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms